RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SARS2Q9NP81 518 aaKnown RBP-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 ARL15Q9NXU5 204 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 SIRPGQ9P1W8 387 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 TINAGQ9UJW2 476 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 HPSEQ9Y251 543 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 C11orf97A0A1B0GVM6 126 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 MPTX1A8MV57 137 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 TNPO2O14787 897 aaKnown RBP-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 NXPH2O95156 264 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 ASMTLO95671 621 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 CD1EP15812 388 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 ANXA7P20073 488 aaKnown RBP-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 PTPN3P26045 913 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 OPRL1P41146 370 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 KIR3DL2P43630 455 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 CLCN4P51793 760 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 EEF1A1P68104 462 aaKnown RBP-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 SLC13A2Q13183 592 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 SERINC3Q13530 473 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 AAK1Q2M2I8 961 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 HLA-BQ31612 363 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 C5orf22Q49AR2 442 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 THEMIS2Q5TEJ8 643 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 EEF1A1P5Q5VTE0 462 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 OR7E24Q6IFN5 339 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 FBXO38Q6PIJ6 1188 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF783Q6ZMS7 281 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 PIK3AP1Q6ZUJ8 805 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 NECAB2Q7Z6G3 386 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 FOXRED2Q8IWF2 684 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 HSCBQ8IWL3 235 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 MKXQ8IYA7 352 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 HACE1Q8IYU2 909 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 RNF182Q8N6D2 247 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF491Q8N8L2 437 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 LINC01006Q8NI28 216 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF519Q8TB69 540 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 ADAMTS16Q8TE57 1224 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 HDAC7Q8WUI4 952 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 OVCA2Q8WZ82 227 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 PMM1Q92871 262 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 PCYT2Q99447 389 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 TAB2Q9NYJ8 693 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 DNAJB4Q9UDY4 337 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 HERC5Q9UII4 1024 aaKnown RBP-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 MORC2Q9Y6X9 1032 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 BRWD3Q6RI45 1802 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 CACNA1DQ01668 2161 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 SLIT3O75094 1523 aa-0.94□□□□□ -2.56
RNU6-539P-201ENST00000516665 TRIM75PA6NK02 468 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 AQP7P3A6NL99 342 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 A8MXK9 166 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 AP1G1O43747 822 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 KHDRBS3O75525 346 aaKnown RBP-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 MYBP10242 640 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 PEPDP12955 493 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 GDF1P27539 372 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 HNRNPH1P31943 449 aaKnown RBP-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 STX2P32856 288 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 MMP12P39900 470 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 ABCE1P61221 599 aaKnown RBP-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 PPIAP62937 165 aaKnown RBP-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 GALNT2Q10471 571 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 GNL2Q13823 731 aaKnown RBP-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 CAPSQ13938 189 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF234Q14588 700 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 KCTD19Q17RG1 926 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 DCAF6Q58WW2 860 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 ALS2CLQ60I27 953 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 PSRC1Q6PGN9 363 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 LRRC31Q6UY01 552 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 CCDC71LQ8N9Z2 235 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 PLBD2Q8NHP8 589 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 FAR1Q8WVX9 515 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 HDAC11Q96DB2 347 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 WDFY2Q96P53 400 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF184Q99676 751 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZCWPW1Q9H0M4 648 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 FAM83DQ9H4H8 585 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 GORASP2Q9H8Y8 452 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 AS3MTQ9HBK9 375 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 Q9UF83 564 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 APOBEC2Q9Y235 224 aaKnown RBP-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 PCDHB7Q9Y5E2 793 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 WASHC2AQ641Q2 1341 aa-0.95□□□□□ -2.56
RNU6-539P-201ENST00000516665 GPR179Q6PRD1 2367 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 DMBT1Q9UGM3 2413 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 IGKV3D-11A0A0A0MRZ8 115 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 KLF18A0A0U1RQI7 1052 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 TRIM49BA6NDI0 452 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 RHPN2P1A8MT19 583 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 CDC123O75794 336 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 RASSF9O75901 435 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 IPO7O95373 1038 aaKnown RBP-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 DDAH2O95865 285 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 LIFP15018 202 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 NPR1P16066 1061 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 TPH1P17752 444 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 GNAZP19086 355 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms