RNA–Protein interactions for RNA: ENST00000483859.6

SENP6-208, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-208ENST00000483859 WFIKKN2Q8TEU8 576 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 NOC3LQ8WTT2 800 aaKnown RBP3.32□□□□□ -1.88
SENP6-208ENST00000483859 TRIB2Q92519 343 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 SMARCE1Q969G3 411 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 FAM149B1Q96BN6 582 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 ELMOD3Q96FG2 381 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 CMTM3Q96MX0 182 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 CSF3RQ99062 836 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 PCYT2Q99447 389 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 TREX2Q9BQ50 279 aaPredicted RBP3.32□□□□□ -1.88
SENP6-208ENST00000483859 FAM110AQ9BQ89 295 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 RBM38Q9H0Z9 239 aaKnown RBP3.32□□□□□ -1.88
SENP6-208ENST00000483859 TMX4Q9H1E5 349 aaPredicted RBP3.32□□□□□ -1.88
SENP6-208ENST00000483859 MMP25Q9NPA2 562 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 GPR108Q9NPR9 543 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 ERRFI1Q9UJM3 462 aaPredicted RBP3.32□□□□□ -1.88
SENP6-208ENST00000483859 PCDHGB4Q9UN71 923 aa3.32□□□□□ -1.88
SENP6-208ENST00000483859 SRPRBQ9Y5M8 271 aaKnown RBP3.32□□□□□ -1.88
SENP6-208ENST00000483859 RSF1Q96T23 1441 aaPredicted RBP3.32□□□□□ -1.88
SENP6-208ENST00000483859 IGHV4-28A0A0C4DH34 117 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 A0A1W2PRG0 241 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 H3BQ06 376 aaPredicted RBP3.31□□□□□ -1.88
SENP6-208ENST00000483859 VILLO15195 856 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 HNRNPCL1O60812 293 aaKnown RBP3.31□□□□□ -1.88
SENP6-208ENST00000483859 NDUFS7O75251 213 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 DDNO94850 711 aaPredicted RBP3.31□□□□□ -1.88
SENP6-208ENST00000483859 KCNK5O95279 499 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 HOXB5P09067 269 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 T-ENOLP0DO92 83 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 NAGAP17050 411 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 TBXAS1P24557 533 aaPredicted RBP3.31□□□□□ -1.88
SENP6-208ENST00000483859 MCM3P25205 808 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 SSTR2P30874 369 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 HNRNPH1P31943 449 aaKnown RBP3.31□□□□□ -1.88
SENP6-208ENST00000483859 ACSL1P33121 698 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 CASP2P42575 452 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 PDLIM4P50479 330 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 METAP2P50579 478 aaKnown RBP eCLIP3.31□□□□□ -1.88
SENP6-208ENST00000483859 NUDT6P53370 316 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 MC1RQ01726 317 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 CREB5Q02930 508 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 NIPAL4Q0D2K0 466 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 OLIG2Q13516 323 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 DUSP28Q4G0W2 176 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 FSCBQ5H9T9 825 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 FAM69BQ5VUD6 431 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 NCAPH2Q6IBW4 605 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 ZNF280DQ6N043 979 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 CFAP77Q6ZQR2 320 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 CHST9Q7L1S5 443 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 ZNF329Q86UD4 541 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 WDR63Q8IWG1 891 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 DNASE2BQ8WZ79 361 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 RHBDF1Q96CC6 855 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 RSRC1Q96IZ7 334 aaKnown RBP3.31□□□□□ -1.88
SENP6-208ENST00000483859 ZNF570Q96NI8 536 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 SLITRK1Q96PX8 696 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 DCLK3Q9C098 648 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 PPP1R3EQ9H7J1 279 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 SEBOXQ9HB31 216 aaPredicted RBP3.31□□□□□ -1.88
SENP6-208ENST00000483859 HINT3Q9NQE9 182 aaKnown RBP3.31□□□□□ -1.88
SENP6-208ENST00000483859 TERF2IPQ9NYB0 399 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 EHD2Q9NZN4 543 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 DLGAP2Q9P1A6 1054 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 VPS28Q9UK41 221 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 RCOR1Q9UKL0 485 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 ZNF215Q9UL58 517 aaPredicted RBP3.31□□□□□ -1.88
SENP6-208ENST00000483859 FZD10Q9ULW2 581 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 CDC14AQ9UNH5 594 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 SLC45A1Q9Y2W3 748 aa3.31□□□□□ -1.88
SENP6-208ENST00000483859 UTYO14607 1347 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 A0A1B0GVM2 712 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 hCG_1807616A0A1W2PRN6 198 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 ANKRD18BA2A2Z9 1011 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 LINC01553A4QN01 128 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 SLC28A2O43868 658 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 IPO7O95373 1038 aaKnown RBP3.3□□□□□ -1.88
SENP6-208ENST00000483859 PGM3O95394 542 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 VNN2O95498 520 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 PORP16435 677 aaPredicted RBP3.3□□□□□ -1.88
SENP6-208ENST00000483859 ZNF182P17025 639 aaPredicted RBP3.3□□□□□ -1.88
SENP6-208ENST00000483859 MAOAP21397 527 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 CHATP28329 748 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 RPL3P39023 403 aaKnown RBP3.3□□□□□ -1.88
SENP6-208ENST00000483859 ENTPD1P49961 510 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 GALCP54803 685 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 CDH8P55286 799 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 USP41Q3LFD5 358 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 DNTTIP2Q5QJE6 756 aaKnown RBP3.3□□□□□ -1.88
SENP6-208ENST00000483859 SPATA1Q5VX52 437 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 TYW3Q6IPR3 259 aaKnown RBP3.3□□□□□ -1.88
SENP6-208ENST00000483859 GLDNQ6ZMI3 551 aaPredicted RBP3.3□□□□□ -1.88
SENP6-208ENST00000483859 SEPT14Q6ZU15 432 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 DPPA4Q7L190 304 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 NR2C2APQ86WQ0 139 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 SPATA6LQ8N4H0 392 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 AGBL3Q8NEM8 1001 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 NEK9Q8TD19 979 aa3.3□□□□□ -1.88
SENP6-208ENST00000483859 SCFD2Q8WU76 684 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms