RNA–Protein interactions for RNA: ENST00000483859.6

SENP6-208, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-208ENST00000483859 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
SENP6-208ENST00000483859 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
SENP6-208ENST00000483859 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
SENP6-208ENST00000483859 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
SENP6-208ENST00000483859 FOXD1Q16676 465 aa20.47■□□□□ 0.87
SENP6-208ENST00000483859 POTEDQ86YR6 584 aa19.7■□□□□ 0.74
SENP6-208ENST00000483859 MSH5O43196 834 aa19.14■□□□□ 0.65
SENP6-208ENST00000483859 PIAS4Q8N2W9 510 aaPredicted RBP18.98■□□□□ 0.63
SENP6-208ENST00000483859 PPP6R1Q9UPN7 881 aa18.86■□□□□ 0.61
SENP6-208ENST00000483859 ADRA2BP18089 450 aa18.76■□□□□ 0.59
SENP6-208ENST00000483859 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
SENP6-208ENST00000483859 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
SENP6-208ENST00000483859 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
SENP6-208ENST00000483859 SCAF1Q9H7N4 1312 aaKnown RBP16.87■□□□□ 0.29
SENP6-208ENST00000483859 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
SENP6-208ENST00000483859 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
SENP6-208ENST00000483859 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
SENP6-208ENST00000483859 RNF39Q9H2S5 420 aa16.38■□□□□ 0.21
SENP6-208ENST00000483859 HOXD11P31277 338 aaPredicted RBP16.35■□□□□ 0.21
SENP6-208ENST00000483859 CNKSR2Q8WXI2 1034 aa16.11■□□□□ 0.17
SENP6-208ENST00000483859 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
SENP6-208ENST00000483859 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
SENP6-208ENST00000483859 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
SENP6-208ENST00000483859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.093e-7■□□□□ 10.5
SENP6-208ENST00000483859 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
SENP6-208ENST00000483859 NPM3O75607 178 aaKnown RBP15.42■□□□□ 0.06
SENP6-208ENST00000483859 POTEHQ6S545 545 aa15.3■□□□□ 0.04
SENP6-208ENST00000483859 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
SENP6-208ENST00000483859 U3KPZ7 1027 aaPredicted RBP15.3■□□□□ 0.04
SENP6-208ENST00000483859 CAPN15O75808 1086 aa15.22■□□□□ 0.03
SENP6-208ENST00000483859 DSG3P32926 999 aa15.22■□□□□ 0.03
SENP6-208ENST00000483859 ABCB7O75027 752 aa14.92□□□□□ -0.02
SENP6-208ENST00000483859 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
SENP6-208ENST00000483859 SLC4A2P04920 1241 aa14.89□□□□□ -0.03
SENP6-208ENST00000483859 KCNA4P22459 653 aa14.76□□□□□ -0.05
SENP6-208ENST00000483859 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
SENP6-208ENST00000483859 APLP2Q06481 763 aa14.52□□□□□ -0.09
SENP6-208ENST00000483859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
SENP6-208ENST00000483859 HNRNPUL2Q1KMD3 747 aaKnown RBP14.45□□□□□ -0.1
SENP6-208ENST00000483859 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
SENP6-208ENST00000483859 CHRDL2Q6WN34 429 aa14.38□□□□□ -0.11
SENP6-208ENST00000483859 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
SENP6-208ENST00000483859 POLA2Q14181 598 aa14.35□□□□□ -0.11
SENP6-208ENST00000483859 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
SENP6-208ENST00000483859 ATF5Q9Y2D1 282 aaPredicted RBP14.12□□□□□ -0.15
SENP6-208ENST00000483859 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
SENP6-208ENST00000483859 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
SENP6-208ENST00000483859 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
SENP6-208ENST00000483859 REM2Q8IYK8 340 aaPredicted RBP13.96□□□□□ -0.17
SENP6-208ENST00000483859 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
SENP6-208ENST00000483859 HAX1O00165 279 aa13.86□□□□□ -0.19
SENP6-208ENST00000483859 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
SENP6-208ENST00000483859 EVX2Q03828 476 aa13.79□□□□□ -0.2
SENP6-208ENST00000483859 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
SENP6-208ENST00000483859 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
SENP6-208ENST00000483859 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.217e-6■■□□□ 12
SENP6-208ENST00000483859 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
SENP6-208ENST00000483859 ZBTB22O15209 634 aa13.61□□□□□ -0.23
SENP6-208ENST00000483859 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
SENP6-208ENST00000483859 CLEC11AQ9Y240 323 aa13.47□□□□□ -0.25
SENP6-208ENST00000483859 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
SENP6-208ENST00000483859 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
SENP6-208ENST00000483859 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
SENP6-208ENST00000483859 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
SENP6-208ENST00000483859 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
SENP6-208ENST00000483859 FBLN2P98095 1184 aa13.34□□□□□ -0.27
SENP6-208ENST00000483859 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
SENP6-208ENST00000483859 GABBR2O75899 941 aa13.32□□□□□ -0.28
SENP6-208ENST00000483859 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
SENP6-208ENST00000483859 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
SENP6-208ENST00000483859 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
SENP6-208ENST00000483859 LHX8Q68G74 356 aa13.24□□□□□ -0.29
SENP6-208ENST00000483859 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
SENP6-208ENST00000483859 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
SENP6-208ENST00000483859 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
SENP6-208ENST00000483859 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
SENP6-208ENST00000483859 CD44P16070 742 aaKnown RBP13□□□□□ -0.33
SENP6-208ENST00000483859 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
SENP6-208ENST00000483859 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
SENP6-208ENST00000483859 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
SENP6-208ENST00000483859 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.37
SENP6-208ENST00000483859 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
SENP6-208ENST00000483859 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
SENP6-208ENST00000483859 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
SENP6-208ENST00000483859 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
SENP6-208ENST00000483859 OTUD5Q96G74 571 aa12.67□□□□□ -0.38
SENP6-208ENST00000483859 CLCN6P51797 869 aa12.63□□□□□ -0.39
SENP6-208ENST00000483859 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
SENP6-208ENST00000483859 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
SENP6-208ENST00000483859 POTEMA6NI47 508 aa12.52□□□□□ -0.41
SENP6-208ENST00000483859 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
SENP6-208ENST00000483859 POTEGQ6S5H5 508 aa12.46□□□□□ -0.41
SENP6-208ENST00000483859 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
SENP6-208ENST00000483859 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
SENP6-208ENST00000483859 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
SENP6-208ENST00000483859 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
SENP6-208ENST00000483859 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
SENP6-208ENST00000483859 MS4A3Q96HJ5 214 aa12.39□□□□□ -0.43
SENP6-208ENST00000483859 METRNQ9UJH8 293 aa12.36□□□□□ -0.43
SENP6-208ENST00000483859 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms