RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 APOBEC2Q9Y235 224 aaKnown RBP11.4□□□□□ -0.58
RAPGEF1-207ENST00000481260 NEUROG3Q9Y4Z2 214 aa11.4□□□□□ -0.58
RAPGEF1-207ENST00000481260 SPO11Q9Y5K1 396 aa11.4□□□□□ -0.58
RAPGEF1-207ENST00000481260 ADGRG1Q9Y653 693 aa11.4□□□□□ -0.58
RAPGEF1-207ENST00000481260 GOLGA4Q13439 2230 aaKnown RBP11.4□□□□□ -0.58
RAPGEF1-207ENST00000481260 LRP4O75096 1905 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 CFAP69A5D8W1 941 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 FAM221BA6H8Z2 402 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 CAPN8A6NHC0 703 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 TAF4O00268 1085 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 PMPCBO75439 489 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 RFPL3O75679 317 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 SLC4A1P02730 911 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 ZFXP17010 805 aaPredicted RBP11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 CKMT2P17540 419 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 TGM2P21980 687 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 RBL1P28749 1068 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 TRIM23P36406 574 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 CHRNA4P43681 627 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 HK3P52790 923 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 HNRNPKP61978 463 aaKnown RBP eCLIP11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 YPEL5P62699 121 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 INSM1Q01101 510 aaPredicted RBP11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 PPARDQ03181 441 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 TFDP2Q14188 446 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 SMAD1Q15797 465 aaKnown RBP11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 INAVAQ3KP66 663 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 ODF2Q5BJF6 829 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 RALGPS1Q5JS13 557 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 PERM1Q5SV97 790 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 ZNF648Q5T619 568 aaPredicted RBP11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 ESRP1Q6NXG1 681 aaKnown RBP11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 DOK6Q6PKX4 331 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 KDELC1Q6UW63 502 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 BBS12Q6ZW61 710 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 TMPRSS7Q7RTY8 843 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 LYSMD3Q7Z3D4 306 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 SLC35F3Q8IY50 421 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 ZNF567Q8N184 647 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 KYQ8NBH2 561 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 KIAA1524Q8TCG1 905 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 TFB1MQ8WVM0 346 aaKnown RBP11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 IFT43Q96FT9 208 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 TEKT5Q96M29 485 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 WDR92Q96MX6 357 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 RIOK2Q9BVS4 552 aaKnown RBP11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 OSBPL8Q9BZF1 889 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 TMEM168Q9H0V1 697 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 ARFGAP3Q9NP61 516 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 NLGN3Q9NZ94 848 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 KLQ9UEF7 1012 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 SHOC2Q9UQ13 582 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 R3HDM2Q9Y2K5 976 aaKnown RBP11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 TMEM98Q9Y2Y6 226 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 MSRB2Q9Y3D2 182 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 ANKRD11Q6UB99 2663 aaPredicted RBP11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 ASXL3Q9C0F0 2248 aa11.39□□□□□ -0.59
RAPGEF1-207ENST00000481260 FADS2P1A8MWK0 482 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 PPP1R12AO14974 1030 aaPredicted RBP11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 INPP4BO15327 924 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 RASGRP1O95267 797 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 TRIM16O95361 564 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 CEACAM5P06731 702 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 CYP2A6P11509 494 aaPredicted RBP11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 CKMT1AP12532 417 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 CA5AP35218 305 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 EPHB1P54762 984 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 KIAA1024LP59773 190 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 CDK3Q00526 305 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 OTUD4Q01804 1114 aaKnown RBP11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 CAMK2BQ13554 666 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 PTK2BQ14289 1009 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 PPP2R5EQ16537 467 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 ST3GAL2Q16842 350 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 TEX44Q53QW1 395 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 HES3Q5TGS1 186 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 USP45Q70EL2 814 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 FAM174AQ8TBP5 190 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 MDM1Q8TC05 714 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 ACTL9Q8TC94 416 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 P3H4Q92791 437 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 TEX101Q9BY14 249 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 SLC25A51Q9H1U9 297 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 WDR26Q9H7D7 661 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 CYP4F12Q9HCS2 524 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 SPASTQ9UBP0 616 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 AMACRQ9UHK6 382 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 CNOT6Q9ULM6 557 aaKnown RBP11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 OAS3Q9Y6K5 1087 aaKnown RBP11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 PKD1L2Q7Z442 2459 aa11.38□□□□□ -0.59
RAPGEF1-207ENST00000481260 CHD6Q8TD26 2715 aa11.37□□□□□ -0.59
RAPGEF1-207ENST00000481260 APC2O95996 2303 aa11.37□□□□□ -0.59
RAPGEF1-207ENST00000481260 C1orf232A0A0U1RR37 186 aa11.37□□□□□ -0.59
RAPGEF1-207ENST00000481260 CPED1A4D0V7 1026 aa11.37□□□□□ -0.59
RAPGEF1-207ENST00000481260 PMS2P1A4D2B8 440 aa11.37□□□□□ -0.59
RAPGEF1-207ENST00000481260 ANKRD66B4E2M5 251 aa11.37□□□□□ -0.59
RAPGEF1-207ENST00000481260 LMO7DNF2Z398 122 aa11.37□□□□□ -0.59
RAPGEF1-207ENST00000481260 IPO7O95373 1038 aaKnown RBP11.37□□□□□ -0.59
RAPGEF1-207ENST00000481260 PROS1P07225 676 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms