RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	SELENON	Q9NZV5	590 aa		5	□□□□□ -1.61
PRKD3-208	ENST00000475912	FZD10	Q9ULW2	581 aa		5	□□□□□ -1.61
PRKD3-208	ENST00000475912	NOTCH4	Q99466	2003 aa		5	□□□□□ -1.61
PRKD3-208	ENST00000475912	KIF16B	Q96L93	1317 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912		A0A0A0MQY5	61 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	HMX3	A6NHT5	357 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	FAM90A20P	A6NIJ5	464 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912		H0Y3Z8	333 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	SYN3	O14994	580 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	PIP5K1C	O60331	668 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	TMCC1	O94876	653 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	PGK1	P00558	417 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	HLA-DQA2	P01906	255 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	FCGR2A	P12318	317 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	UNG	P13051	313 aa	Predicted RBP	4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	BTD	P43251	543 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	PPP3CC	P48454	512 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	PCYT1A	P49585	367 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	ZP1	P60852	638 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	ABAT	P80404	500 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912		Q0VFX4	171 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	PPIG	Q13427	754 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	PKP1	Q13835	747 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	ASIC2	Q16515	512 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	CCDC38	Q502W7	563 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	CCDC174	Q6PII3	467 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	RINL	Q6ZS11	566 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912		Q6ZSV7	163 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	SYT13	Q7L8C5	426 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	ANKRD42	Q8N9B4	389 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	SMRP1	Q8NCR6	262 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	PRSS33	Q8NF86	280 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	ELP5	Q8TE02	316 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	NUDCD2	Q8WVJ2	157 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	APOLD1	Q96LR9	279 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	MEIS3	Q99687	375 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	HERPUD2	Q9BSE4	406 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	CATSPERB	Q9H7T0	1116 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	GRHPR	Q9UBQ7	328 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	KL	Q9UEF7	1012 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	CDH22	Q9UJ99	828 aa		4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.99	□□□□□ -1.61
PRKD3-208	ENST00000475912	SALL1	Q9NSC2	1324 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912		A0A0G2JMZ2	1700 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	SPTBN4	Q9H254	2564 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	SAC3D1	A6NKF1	404 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	ACP5	P13686	325 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	CHN1	P15882	459 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	AVPR2	P30518	371 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	HOXD3	P31249	432 aa	Predicted RBP	4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	CHKA	P35790	457 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	AVPR1A	P37288	418 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	KRTAP10-7	P60409	375 aa	Predicted RBP	4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	CRYZ	Q08257	329 aa	Known RBP	4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	TANGO2	Q6ICL3	276 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	RASGRP2	Q7LDG7	609 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	ZNF367	Q7RTV3	350 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	NKAP	Q8N5F7	415 aa	Known RBP	4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	CEP76	Q8TAP6	659 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	BICD2	Q8TD16	824 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	FAR1	Q8WVX9	515 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	DDX23	Q9BUQ8	820 aa	Known RBP	4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	IFT27	Q9BW83	186 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	KLHL31	Q9H511	634 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	DNAJC18	Q9H819	358 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	UPB1	Q9UBR1	384 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	WNT16	Q9UBV4	365 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	RABGAP1	Q9Y3P9	1069 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	ZDBF2	Q9HCK1	2354 aa		4.98	□□□□□ -1.61
PRKD3-208	ENST00000475912	UMODL1	Q5DID0	1318 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	ATAD5	Q96QE3	1844 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	ZNF236	Q9UL36	1845 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	PRRC2B	Q5JSZ5	2229 aa	Known RBP	4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	VPS13A	Q96RL7	3174 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	GBF1	Q92538	1859 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	ROBO3	Q96MS0	1386 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	C19orf81	C9J6K1	198 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912		E7EVH7	732 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	MS4A18	H0YCH9	400 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	LIAS	O43766	372 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	KRT38	O76015	456 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	CA3	P07451	260 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	IFIT1	P09914	478 aa	Known RBP	4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	CYP4B1	P13584	511 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	IL9	P15248	144 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	PRKCH	P24723	683 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	ACLY	P53396	1101 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	PRKAA2	P54646	552 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	CCNA1	P78396	465 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	TIGD6	Q17RP2	521 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	TWISTNB	Q3B726	338 aa	Predicted RBP	4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	RABL6	Q3YEC7	729 aa	Predicted RBP	4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	SYTL3	Q4VX76	610 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	HEPHL1	Q6MZM0	1159 aa		4.97	□□□□□ -1.61
PRKD3-208	ENST00000475912	GALNT7	Q86SF2	657 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms