RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 AEBP2Q6ZN18 517 aaPredicted RBP28.45■■■□□ 2.14
PRKD3-208ENST00000475912 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
PRKD3-208ENST00000475912 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
PRKD3-208ENST00000475912 SENP3Q9H4L4 574 aaPredicted RBP24.14■■□□□ 1.45
PRKD3-208ENST00000475912 FOXD1Q16676 465 aa22.46■■□□□ 1.19
PRKD3-208ENST00000475912 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
PRKD3-208ENST00000475912 PPP6R1Q9UPN7 881 aa21.44■■□□□ 1.02
PRKD3-208ENST00000475912 ADRA2BP18089 450 aa21.41■■□□□ 1.02
PRKD3-208ENST00000475912 POTEDQ86YR6 584 aa21.34■■□□□ 1.01
PRKD3-208ENST00000475912 MSH5O43196 834 aa21.13■□□□□ 0.97
PRKD3-208ENST00000475912 PIAS4Q8N2W9 510 aaPredicted RBP21.13■□□□□ 0.97
PRKD3-208ENST00000475912 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.72
PRKD3-208ENST00000475912 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
PRKD3-208ENST00000475912 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
PRKD3-208ENST00000475912 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
PRKD3-208ENST00000475912 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
PRKD3-208ENST00000475912 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
PRKD3-208ENST00000475912 KCNA4P22459 653 aa18.89■□□□□ 0.61
PRKD3-208ENST00000475912 RNF216Q9NWF9 866 aaPredicted RBP18.75■□□□□ 0.59
PRKD3-208ENST00000475912 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
PRKD3-208ENST00000475912 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
PRKD3-208ENST00000475912 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
PRKD3-208ENST00000475912 CACNB1Q02641 598 aaPredicted RBP18.37■□□□□ 0.53
PRKD3-208ENST00000475912 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
PRKD3-208ENST00000475912 RNF39Q9H2S5 420 aa17.95■□□□□ 0.46
PRKD3-208ENST00000475912 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
PRKD3-208ENST00000475912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.88■□□□□ 0.45
PRKD3-208ENST00000475912 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
PRKD3-208ENST00000475912 C1QBPQ07021 282 aaKnown RBP17.7■□□□□ 0.42
PRKD3-208ENST00000475912 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
PRKD3-208ENST00000475912 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
PRKD3-208ENST00000475912 ZBTB22O15209 634 aa17.38■□□□□ 0.37
PRKD3-208ENST00000475912 MYCNP04198 464 aaPredicted RBP17.3■□□□□ 0.36
PRKD3-208ENST00000475912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
PRKD3-208ENST00000475912 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
PRKD3-208ENST00000475912 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
PRKD3-208ENST00000475912 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
PRKD3-208ENST00000475912 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
PRKD3-208ENST00000475912 CAPN15O75808 1086 aa17.11■□□□□ 0.33
PRKD3-208ENST00000475912 APLP2Q06481 763 aa17.09■□□□□ 0.33
PRKD3-208ENST00000475912 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
PRKD3-208ENST00000475912 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
PRKD3-208ENST00000475912 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
PRKD3-208ENST00000475912 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
PRKD3-208ENST00000475912 DSG3P32926 999 aa16.85■□□□□ 0.29
PRKD3-208ENST00000475912 ATXN8OSP0DMR3 200 aa16.8■□□□□ 0.28
PRKD3-208ENST00000475912 ABCB7O75027 752 aa16.78■□□□□ 0.28
PRKD3-208ENST00000475912 POTEHQ6S545 545 aa16.65■□□□□ 0.26
PRKD3-208ENST00000475912 POLA2Q14181 598 aa16.63■□□□□ 0.25
PRKD3-208ENST00000475912 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
PRKD3-208ENST00000475912 FBLN2P98095 1184 aa16.16■□□□□ 0.18
PRKD3-208ENST00000475912 MKRN4PQ13434 485 aaPredicted RBP16.14■□□□□ 0.17
PRKD3-208ENST00000475912 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
PRKD3-208ENST00000475912 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
PRKD3-208ENST00000475912 SPDYE2BA6NHP3 402 aa15.84■□□□□ 0.13
PRKD3-208ENST00000475912 SPDYE6P0CI01 402 aa15.84■□□□□ 0.13
PRKD3-208ENST00000475912 SPDYE2Q495Y8 402 aa15.84■□□□□ 0.13
PRKD3-208ENST00000475912 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
PRKD3-208ENST00000475912 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
PRKD3-208ENST00000475912 CHRDL2Q6WN34 429 aa15.74■□□□□ 0.11
PRKD3-208ENST00000475912 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
PRKD3-208ENST00000475912 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
PRKD3-208ENST00000475912 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
PRKD3-208ENST00000475912 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
PRKD3-208ENST00000475912 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
PRKD3-208ENST00000475912 FKBP8Q14318 412 aa15.46■□□□□ 0.07
PRKD3-208ENST00000475912 SPDYE1Q8NFV5 336 aaPredicted RBP15.45■□□□□ 0.06
PRKD3-208ENST00000475912 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
PRKD3-208ENST00000475912 SP7Q8TDD2 431 aaPredicted RBP15.41■□□□□ 0.06
PRKD3-208ENST00000475912 PROM2Q8N271 834 aa15.33■□□□□ 0.04
PRKD3-208ENST00000475912 PIP4P2Q8N4L2 257 aa15.26■□□□□ 0.03
PRKD3-208ENST00000475912 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
PRKD3-208ENST00000475912 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
PRKD3-208ENST00000475912 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
PRKD3-208ENST00000475912 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
PRKD3-208ENST00000475912 HAX1O00165 279 aa15.1■□□□□ 0.01
PRKD3-208ENST00000475912 CHADLQ6NUI6 762 aa15.08■□□□□ 0
PRKD3-208ENST00000475912 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
PRKD3-208ENST00000475912 FBXO3Q9UK99 471 aa14.92□□□□□ -0.02
PRKD3-208ENST00000475912 FARP1Q9Y4F1 1045 aaPredicted RBP14.89□□□□□ -0.03
PRKD3-208ENST00000475912 MIER1Q8N108 512 aa14.86□□□□□ -0.03
PRKD3-208ENST00000475912 EVX2Q03828 476 aa14.82□□□□□ -0.04
PRKD3-208ENST00000475912 PLCD3Q8N3E9 789 aa14.82□□□□□ -0.04
PRKD3-208ENST00000475912 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
PRKD3-208ENST00000475912 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
PRKD3-208ENST00000475912 VASPP50552 380 aaPredicted RBP14.76□□□□□ -0.05
PRKD3-208ENST00000475912 C19orf67A6NJJ6 358 aa14.74□□□□□ -0.05
PRKD3-208ENST00000475912 NPM1P06748 294 aaKnown RBP eCLIP14.7□□□□□ -0.06
PRKD3-208ENST00000475912 CD44P16070 742 aaKnown RBP14.67□□□□□ -0.06
PRKD3-208ENST00000475912 ZBTB47Q9UFB7 747 aaPredicted RBP14.63□□□□□ -0.07
PRKD3-208ENST00000475912 KLHL34Q8N239 644 aa14.57□□□□□ -0.08
PRKD3-208ENST00000475912 IFNLR1Q8IU57 520 aaPredicted RBP14.55□□□□□ -0.08
PRKD3-208ENST00000475912 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
PRKD3-208ENST00000475912 PAK3O75914 559 aaPredicted RBP14.53□□□□□ -0.08
PRKD3-208ENST00000475912 RASEFQ8IZ41 740 aa14.52□□□□□ -0.09
PRKD3-208ENST00000475912 GABBR2O75899 941 aa14.51□□□□□ -0.09
PRKD3-208ENST00000475912 NUBP1P53384 320 aa14.51□□□□□ -0.09
PRKD3-208ENST00000475912 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
PRKD3-208ENST00000475912 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
PRKD3-208ENST00000475912 LHX8Q68G74 356 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms