RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SRRM3A6NNA2 597 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 SLC7A4O43246 635 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 HTRA2O43464 458 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 SNAP91O60641 907 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 RNASEH1O60930 286 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 AVILO75366 819 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 KAT7O95251 611 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 PGLSO95336 258 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 CD160O95971 181 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 MT-CYBP00156 380 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 EGFP01133 1207 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 MMP2P08253 660 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 SNRPAP09012 282 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 CYP2A6P11509 494 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 ZNF30P17039 623 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 LPOP22079 712 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 PSMA3P25788 255 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 MGAT1P26572 445 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 GJA4P35212 333 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 SPRP35270 261 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 GALK1P51570 392 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 DGKEP52429 567 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 MRPS21P82921 87 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 DSC2Q02487 901 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 THOC5Q13769 683 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 LONRF1Q17RB8 773 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 USP39Q53GS9 565 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 FAXCQ5TGI0 409 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 LYPLAL1Q5VWZ2 237 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 DENND5AQ6IQ26 1287 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 MRNIPQ6NTE8 343 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 GDPD4Q6W3E5 623 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 LCA5Q86VQ0 697 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 CBARPQ8N350 705 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 PGBD5Q8N414 524 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 NAT16Q8N8M0 369 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 TERB1Q8NA31 727 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 OR52K2Q8NGK3 314 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 SPATA22Q8NHS9 363 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 FBF1Q8TES7 1133 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 HEXDCQ8WVB3 486 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 GATA6Q92908 595 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 RAB7BQ96AH8 199 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 PPP1R16AQ96I34 528 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 CABS1Q96KC9 395 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 ATP6V1G3Q96LB4 118 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 HHIPQ96QV1 700 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 LYSMD1Q96S90 227 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 CPNE1Q99829 537 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 P2RY13Q9BPV8 354 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 FAM167BQ9BTA0 163 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 FICDQ9BVA6 458 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 SCNM1Q9BWG6 230 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 TDRD1Q9BXT4 1180 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 CEP41Q9BYV8 373 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 CIPCQ9C0C6 399 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 FBRSL1Q9HCM7 1045 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 HPS4Q9NQG7 708 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 GMPR2Q9P2T1 348 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 PSMC3IPQ9P2W1 217 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 APPL1Q9UKG1 709 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 INTS6Q9UL03 887 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 SCML1Q9UN30 329 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 FCF1Q9Y324 198 aaKnown RBP7.04□□□□□ -1.28
SHQ1-207ENST00000475558 PKP3Q9Y446 797 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 TCAF1Q9Y4C2 921 aa7.04□□□□□ -1.28
SHQ1-207ENST00000475558 ZZEF1O43149 2961 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 PI4KAP42356 2102 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 PKD1L2Q7Z442 2459 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 TCRBV9S1A1TA0A576 114 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 TLDC2A0PJX2 215 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CCDC189A1A4V9 331 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 MROH6A6NGR9 719 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 OTOL1A6NHN0 477 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 FAM159BA6NKW6 160 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 C1QTNF3-AMACRE9PGA6 284 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 AGPSO00116 658 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CDX4O14627 284 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 STX7O15400 261 aaKnown RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 FZD6O60353 706 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 SYNCRIPO60506 623 aaKnown RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 SIN3BO75182 1162 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 MT-CO1P00395 513 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 SPINK2P20155 84 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 XPAP23025 273 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 SSTR1P30872 391 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 HMGCLP35914 325 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CCT5P48643 541 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CSE1LP55060 971 aaKnown RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 MAXP61244 160 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 ZBTB16Q05516 673 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 ZNF844Q08AG5 666 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 SPARCL1Q14515 664 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 ELAVL3Q14576 367 aaKnown RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CRYMQ14894 314 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 UAP1Q16222 522 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 HNRNPA1L2Q32P51 320 aaKnown RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 FUT11Q495W5 492 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 MSS51Q4VC12 460 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 ZNF805Q5CZA5 627 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms