RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CCNG2Q16589 344 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 CPSF6Q16630 551 aaKnown RBP eCLIP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 TYSND1Q2T9J0 566 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 TOR2AQ5JU69 321 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 TTC38Q5R3I4 469 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 SEL1L2Q5TEA6 688 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 MBLAC2Q68D91 279 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 DCUN1D2Q6PH85 259 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 XKRXQ6PP77 449 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 WDR49Q8IV35 697 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 C4orf33Q8N1A6 199 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 LRRC71Q8N4P6 559 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 FANCBQ8NB91 859 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 OR6F1Q8NGZ6 308 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 PCDH19Q8TAB3 1148 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 SHKBP1Q8TBC3 707 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 HDAC11Q96DB2 347 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ARHGEF26Q96DR7 871 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 PTCHD1Q96NR3 888 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 LSM14BQ9BX40 385 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 IDI2Q9BXS1 227 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 STN1Q9H668 368 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 LRRC19Q9H756 370 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 SP110Q9HB58 689 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 FBXO8Q9NRD0 319 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 DDX28Q9NUL7 540 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ACOXLQ9NUZ1 547 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 COPG2Q9UBF2 871 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ENOPH1Q9UHY7 261 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 PRPF19Q9UMS4 504 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 TRBV23OR9-2A0A075B6M9 112 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 PRSS51A0A1B0GVH4 220 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 SAGE2PA6NJ88 616 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 POC1B-GALNT4F8VUJ3 575 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 EYA2O00167 538 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 CBX4O00257 560 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 TP73O15350 636 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 SNAPINO95295 136 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 VNN1O95497 513 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 CPNE6O95741 557 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 ASNSP08243 561 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 TMEM253P0C7T8 217 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 STMN1P16949 149 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 JUNBP17275 347 aaPredicted RBP5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 IL12AP29459 219 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 CDH5P33151 784 aaPredicted RBP5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 SERPINB5P36952 375 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 DDOSTP39656 456 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 SLC25A3Q00325 362 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 IFITM3Q01628 133 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 PMS2P3Q13401 168 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 PTK6Q13882 451 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 PKN2Q16513 984 aaKnown RBP5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 MTHFSDQ2M296 383 aaKnown RBP5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 FSCBQ5H9T9 825 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 BRMS1LQ5PSV4 323 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 ATAD3CQ5T2N8 411 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 GARNL3Q5VVW2 1013 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 TMEM132EQ6IEE7 984 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 ANKS1BQ7Z6G8 1248 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 DPP9Q86TI2 863 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 CATSPER3Q86XQ3 398 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 BBS7Q8IWZ6 715 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 MAGEB6Q8N7X4 407 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 OR13F1Q8NGS4 319 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 SLC30A5Q8TAD4 765 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 GRK7Q8WTQ7 553 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 LPGAT1Q92604 370 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 SLC47A1Q96FL8 570 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 MAGED4Q96JG8 741 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 TBCBQ99426 244 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 GAL3ST1Q99999 423 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 TMEM121Q9BTD3 319 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 GHITMQ9H3K2 345 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 JMJD4Q9H9V9 463 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 ASNSD1Q9NWL6 643 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 ADPRHL2Q9NX46 363 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 MCM9Q9NXL9 1143 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 PSMC3IPQ9P2W1 217 aaPredicted RBP5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 DUSP13Q9UII6 198 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 BAG5Q9UL15 447 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 KCNE2Q9Y6J6 123 aa5.15□□□□□ -1.59
TMEM39A-206ENST00000473684 FER1L6Q2WGJ9 1857 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 ATAD5Q96QE3 1844 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 TMEM82A0PJX8 343 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 PI4KAP2A4QPH2 592 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 PRR5-ARHGAP8B1AHC4 643 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 WDR64B1ANS9 1081 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 NEMP1O14524 444 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 WNT9AO14904 365 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 KCNQ3O43525 872 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 GATCO43716 136 aaKnown RBP5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 KATNA1O75449 491 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 SEMA3DO95025 777 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 F2P00734 622 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 CSF1RP07333 972 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 YES1P07947 543 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 DHRS4L1P0CG22 281 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 TRAPPC2P0DI81 140 aa5.14□□□□□ -1.59
TMEM39A-206ENST00000473684 TRAPPC2BP0DI82 140 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms