RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CYP4F12Q9HCS2 524 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 RBM22Q9NW64 420 aaKnown RBP eCLIP6.12□□□□□ -1.43
HERC4-209ENST00000473533 ZNF639Q9UID6 485 aa6.12□□□□□ -1.43
HERC4-209ENST00000473533 MYOCOSA0A1B0GUC4 107 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 TMEM221A6NGB7 291 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 CCDC154A6NI56 674 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 WASH4PA8MWX3 477 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 GOLGA8TH3BQL2 631 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 FZD9O00144 591 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 INPP4BO15327 924 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 MRPS14O60783 128 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 ZBTB11O95625 1053 aaPredicted RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 PGK2P07205 417 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 HOXD8P13378 290 aaPredicted RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 JAK1P23458 1154 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 GSTM2P28161 218 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 CCR10P46092 362 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 ALDH3A2P51648 485 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 C1QTNF8P60827 252 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 RELAQ04206 551 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 CHRNB3Q05901 458 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 NFATC3Q12968 1075 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 LCP2Q13094 533 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 NR1D2Q14995 579 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 CRY1Q16526 586 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 ANKS6Q68DC2 871 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 DCDC5Q6ZRR9 648 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 USP51Q70EK9 711 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 SPPL2CQ8IUH8 684 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 OR13F1Q8NGS4 319 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 DNAJB8Q8NHS0 232 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 STAG3L4Q8TBR4 150 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 COPS5Q92905 334 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 PPP1R10Q96QC0 940 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 ZNF347Q96SE7 839 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 PPP1R16BQ96T49 567 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 TSPYL2Q9H2G4 693 aaPredicted RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 EPS8L2Q9H6S3 715 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 AKTIPQ9H8T0 292 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 RGS18Q9NS28 235 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 ABCC13Q9NSE7 274 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 GPRC5DQ9NZD1 345 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 EBF1Q9UH73 591 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 DSEQ9UL01 958 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 OAZ3Q9UMX2 235 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 PCDHGB4Q9UN71 923 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 NME7Q9Y5B8 376 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 PCDHGB5Q9Y5G0 923 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 CEP350Q5VT06 3117 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 FAM234BA2RU67 622 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 CLDN25C9JDP6 229 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 AREL1O15033 823 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 SNX2O60749 519 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 USP2O75604 605 aaPredicted RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 CNMDO75829 334 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 SEC14L2O76054 403 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 SEC24DO94855 1032 aaPredicted RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 GLP2RO95838 553 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 RAP2AP10114 183 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 UGT1A6P19224 532 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 UGT1A1P22309 533 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 UGT1A4P22310 534 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 HOXA11P31270 313 aaPredicted RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 UGT1A3P35503 534 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 UGT1A5P35504 534 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 TMED10P49755 219 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 FAM117BQ6P1L5 589 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 RNF135Q8IUD6 432 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 CILP2Q8IUL8 1156 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 ACVR1CQ8NER5 493 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 GPR150Q8NGU9 434 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 DPF3Q92784 378 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 VPS33AQ96AX1 596 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 LRRC3Q9BY71 257 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 MID1IP1Q9NPA3 183 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 UBP1Q9NZI7 540 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 IFT80Q9P2H3 777 aaPredicted RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 POLG2Q9UHN1 485 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 PIN4Q9Y237 131 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 ERGIC3Q9Y282 383 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 HES2Q9Y543 173 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 PDCD11Q14690 1871 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 TSC2P49815 1807 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 FUOMA2VDF0 154 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 YJEFN3A6XGL0 299 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 FAM72CH0Y354 149 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 STX16O14662 325 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 EI24O14681 340 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 SUPT3HO75486 399 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 RPLP2P05387 115 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 THRBP10828 461 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 HLA-DPA1P20036 260 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 SLC6A2P23975 617 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 RPL9P32969 192 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 GRK3P35626 688 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 STT3AP46977 705 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 GSK3BP49841 420 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 CDH15P55291 814 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 WNT3AP56704 352 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 ADARB1P78563 741 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms