RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 TRIM11Q96F44 468 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 DTD2Q96FN9 168 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 ARHGAP9Q9BRR9 750 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 FAM117AQ9C073 453 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 NAT10Q9H0A0 1025 aaKnown RBP17.25■□□□□ 0.35
TRIM56-203ENST00000467847 MRPL47Q9HD33 250 aaKnown RBP17.25■□□□□ 0.35
TRIM56-203ENST00000467847 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRIM56-203ENST00000467847 ETNK2Q9NVF9 386 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 TRNAU1APQ9NX07 287 aaKnown RBP17.25■□□□□ 0.35
TRIM56-203ENST00000467847 GOLGA6AQ9NYA3 693 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 AIPL1Q9NZN9 384 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 SUFUQ9UMX1 484 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 PCDHB11Q9Y5F2 797 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 TLN1Q9Y490 2541 aaKnown RBP17.25■□□□□ 0.35
TRIM56-203ENST00000467847 NPIPB15A6NHN6 443 aaPredicted RBP17.24■□□□□ 0.35
TRIM56-203ENST00000467847 C9orf172C9J069 976 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 DDX3XO00571 662 aaKnown RBP eCLIP17.24■□□□□ 0.356e-8■■■■■ 35.7
TRIM56-203ENST00000467847 B4GAT1O43505 415 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 ECEL1O95672 775 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 FUCA1P04066 466 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 ITGB2P05107 769 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 MYBL1P10243 752 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 CR2P20023 1033 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 LHCGRP22888 699 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 AMPD1P23109 780 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 IL1R2P27930 398 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 CDK3Q00526 305 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 TYRO3Q06418 890 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 KLHL30Q0D2K2 578 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 TRAF2Q12933 501 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 BIRC2Q13490 618 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 C16orf72Q14CZ0 275 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 LINC00303Q3SY05 128 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 E4F1Q66K89 784 aaPredicted RBP17.24■□□□□ 0.35
TRIM56-203ENST00000467847 RAET1GQ6H3X3 334 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 SLC30A9Q6PML9 568 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 ZNF438Q7Z4V0 828 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 HSD11B1LQ7Z5J1 315 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 POLNQ7Z5Q5 900 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 C17orf82Q86X59 251 aaPredicted RBP17.24■□□□□ 0.35
TRIM56-203ENST00000467847 LURAP1LQ8IV03 231 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 ATPAF2Q8N5M1 289 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 NSMCE1Q8WV22 266 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 EXTL1Q92935 676 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 MGME1Q9BQP7 344 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 FRMD8Q9BZ67 464 aaPredicted RBP17.24■□□□□ 0.35
TRIM56-203ENST00000467847 PHTF1Q9UMS5 762 aa17.24■□□□□ 0.35
TRIM56-203ENST00000467847 ZFC3H1O60293 1989 aaKnown RBP17.23■□□□□ 0.35
TRIM56-203ENST00000467847 A0A1W2PQC6 194 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 GOLGA6L22H0YM25 854 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 PSMD11O00231 422 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 MAFKO60675 156 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 TCF4P15884 667 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 AK4P27144 223 aaPredicted RBP17.23■□□□□ 0.35
TRIM56-203ENST00000467847 CD82P27701 267 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 PRKCIP41743 596 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 MMP13P45452 471 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 MAXP61244 160 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 NFATC3Q12968 1075 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 NR1D2Q14995 579 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 PTPRRQ15256 657 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 FILIP1LQ4L180 1135 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 BOLA3Q53S33 107 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 RALGPS1Q5JS13 557 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 TMEM164Q5U3C3 297 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 Q6ZVL8 140 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 USP45Q70EL2 814 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 CBARPQ8N350 705 aaPredicted RBP17.23■□□□□ 0.35
TRIM56-203ENST00000467847 ZSCAN1Q8NBB4 408 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 PTCD2Q8WV60 388 aaKnown RBP17.23■□□□□ 0.35
TRIM56-203ENST00000467847 SCRN2Q96FV2 425 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 CSPG4P5Q96PW8 444 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 NUDT22Q9BRQ3 303 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 PCDHGA4Q9Y5G9 962 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 SDK2Q58EX2 2172 aa17.23■□□□□ 0.35
TRIM56-203ENST00000467847 PGLSO95336 258 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 CCL4P13236 92 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 GPR3P46089 330 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 POLD2P49005 469 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 CDH6P55285 790 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 CTBSQ01459 385 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 PEX6Q13608 980 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 CLPPQ16740 277 aaPredicted RBP17.22■□□□□ 0.35
TRIM56-203ENST00000467847 ANO6Q4KMQ2 910 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 ARMC12Q5T9G4 340 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 MARC1Q5VT66 337 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 DOK6Q6PKX4 331 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 XKR5Q6UX68 686 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 TSPAN33Q86UF1 283 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 DTX1Q86Y01 620 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 RCBTB1Q8NDN9 531 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 PATE1Q8WXA2 126 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 MCCC1Q96RQ3 725 aaPredicted RBP17.22■□□□□ 0.35
TRIM56-203ENST00000467847 B3GNT4Q9C0J1 378 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 SLC17A4Q9Y2C5 497 aa17.22■□□□□ 0.35
TRIM56-203ENST00000467847 IGHV5-10-1A0A0J9YXX1 117 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 HGSO14964 777 aaPredicted RBP17.21■□□□□ 0.35
TRIM56-203ENST00000467847 IVLP07476 585 aa17.21■□□□□ 0.35
TRIM56-203ENST00000467847 RARAP10276 462 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms