RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 GDAQ9Y2T3 454 aa4.16□□□□□ -1.74
ITGB1-208ENST00000464001 RRP7AQ9Y3A4 280 aaKnown RBP4.16□□□□□ -1.74
ITGB1-208ENST00000464001 ADGRF5Q8IZF2 1346 aa4.16□□□□□ -1.74
ITGB1-208ENST00000464001 A0A087X0M5 115 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 C17orf113A0A1B0GUU1 675 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 A0A1B0GX30 115 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 GTPBP10A4D1E9 387 aaKnown RBP4.15□□□□□ -1.75
ITGB1-208ENST00000464001 PABPN1LA6NDY0 278 aaKnown RBP4.15□□□□□ -1.75
ITGB1-208ENST00000464001 ZBED4O75132 1171 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 SERPINB2P05120 415 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 WEE2P0C1S8 567 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 CETPP11597 493 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 PCNAP12004 261 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 SRCP12931 536 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 PTPN2P17706 415 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 GM2AP17900 193 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 GPTP24298 496 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 STX2P32856 288 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 RYKP34925 604 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 BLKP51451 505 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 CRIP2P52943 208 aaPredicted RBP4.15□□□□□ -1.75
ITGB1-208ENST00000464001 DRG2P55039 364 aaKnown RBP4.15□□□□□ -1.75
ITGB1-208ENST00000464001 YWHAZP63104 245 aaKnown RBP4.15□□□□□ -1.75
ITGB1-208ENST00000464001 SOWAHAQ2M3V2 549 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 ATP13A5Q4VNC0 1218 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 PPP6R3Q5H9R7 873 aaPredicted RBP4.15□□□□□ -1.75
ITGB1-208ENST00000464001 FBXO47Q5MNV8 452 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 LNX1Q8TBB1 728 aaPredicted RBP4.15□□□□□ -1.75
ITGB1-208ENST00000464001 LRRC8CQ8TDW0 803 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 RAB40AQ8WXH6 277 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 CNOT9Q92600 299 aaKnown RBP4.15□□□□□ -1.75
ITGB1-208ENST00000464001 VMP1Q96GC9 406 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 GHITMQ9H3K2 345 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 NOD2Q9HC29 1040 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 CDC14AQ9UNH5 594 aa4.15□□□□□ -1.75
ITGB1-208ENST00000464001 GREB1LQ9C091 1923 aaPredicted RBP4.15□□□□□ -1.75
ITGB1-208ENST00000464001 RSF1Q96T23 1441 aaPredicted RBP4.14□□□□□ -1.75
ITGB1-208ENST00000464001 PGPEP1LA6NFU8 196 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 TRIM64A6NGJ6 449 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 TRIM64BA6NI03 449 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 B4DLN1 442 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 CD58P19256 250 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 RXRAP19793 462 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 CHATP28329 748 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 CTNNA1P35221 906 aaKnown RBP4.14□□□□□ -1.75
ITGB1-208ENST00000464001 ACTN2P35609 894 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 IL15P40933 162 aaPredicted RBP4.14□□□□□ -1.75
ITGB1-208ENST00000464001 PIK3CAP42336 1068 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 CLNS1AP54105 237 aaKnown RBP4.14□□□□□ -1.75
ITGB1-208ENST00000464001 PLIN5Q00G26 463 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 NEXNQ0ZGT2 675 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 NEDD9Q14511 834 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 ADCK5Q3MIX3 580 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 ESCO2Q56NI9 601 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 RILPL1Q5EBL4 403 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 HECTD3Q5T447 861 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 CASC1Q6TDU7 716 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 TBC1D26Q86UD7 250 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 LMNTD2Q8IXW0 634 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 PARP16Q8N5Y8 322 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 APPL2Q8NEU8 664 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 HERVK_113Q902F9 699 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 TBC1D31Q96DN5 1066 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 TMEM19Q96HH6 336 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 CD180Q99467 661 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 MPHOSPH8Q99549 860 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 TREX2Q9BQ50 279 aaPredicted RBP4.14□□□□□ -1.75
ITGB1-208ENST00000464001 JMJD4Q9H9V9 463 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 NOX4Q9NPH5 578 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 NSMCE4AQ9NXX6 385 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 TBC1D29Q9UFV1 150 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 TCF19Q9Y242 345 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 DNAJC16Q9Y2G8 782 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 CGNL1Q0VF96 1302 aa4.14□□□□□ -1.75
ITGB1-208ENST00000464001 KLRF2D3W0D1 207 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 F5H0A9 414 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 FAM72CH0Y354 149 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 C16orf97H3BN30 126 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 MID1O15344 667 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 CEP104O60308 925 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 DKC1O60832 514 aaKnown RBP eCLIP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 PAK4O96013 591 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 PSMA3P25788 255 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 HNRNPH1P31943 449 aaKnown RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 MMP14P50281 582 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 NAP1L1P55209 391 aaKnown RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 BPIFB3P59826 476 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 ITGADQ13349 1161 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 PSMD6Q15008 389 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 FAM72AQ5TYM5 149 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 FAM72DQ6L9T8 149 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 PLBD1Q6P4A8 553 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 CCNI2Q6ZMN8 369 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 MARK2Q7KZI7 788 aaKnown RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 FAM72BQ86X60 149 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 FTSJ3Q8IY81 847 aaKnown RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 CCDC191Q8NCU4 936 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 GJC3Q8NFK1 279 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 OR13A1Q8NGR1 328 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 TDRD7Q8NHU6 1098 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms