RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 CST5P28325 142 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CAPGP40121 348 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 GNG2P59768 71 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 POU4F1Q01851 419 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PSMD5Q16401 504 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SLC25A52Q3SY17 297 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ATP13A4Q4VNC1 1196 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PAGE2BQ5JRK9 111 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PPM1LQ5SGD2 360 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PMF1Q6P1K2 205 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 RRM2BQ7LG56 351 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PAGE2Q7Z2X7 111 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PIWIL4Q7Z3Z4 852 aaKnown RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 BNIPLQ7Z465 357 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF605Q86T29 641 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ATPAF2Q8N5M1 289 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 AP3S1Q92572 193 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 FAM120BQ96EK7 910 aaKnown RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ACBD6Q9BR61 282 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 MLPHQ9BV36 600 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CCDC177Q9NQR7 707 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 FAM172BPA6NC97 362 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 UGT2B11O75310 529 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SELPP16109 830 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 RPL22P35268 128 aaKnown RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PRIM2P49643 509 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CCDC157Q569K6 752 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 KCTD8Q6ZWB6 473 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 FAM35AQ86V20 835 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ARMC8Q8IUR7 673 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SEC14L1Q92503 715 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 LPPQ93052 612 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CENPNQ96H22 339 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ZFP42Q96MM3 310 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CITED4Q96RK1 184 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 EMILIN2Q9BXX0 1053 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 HDHD2Q9H0R4 259 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 UNC93B1Q9H1C4 597 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SERHL2Q9H4I8 314 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SERHLQ9NQF3 203 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CD274Q9NZQ7 290 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 H2AFY2Q9P0M6 372 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 HMGXB4Q9UGU5 601 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 MAGEL2Q9UJ55 1249 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 DUSP12Q9UNI6 340 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ERVK-11Q9UQG0 969 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 HTR3EA5X5Y0 456 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 C5orf58C9J3I9 102 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 TLL1O43897 1013 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 YES1P07947 543 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 HOXD12P35452 270 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 HALP42357 657 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 WDR4P57081 412 aaKnown RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 RAD51Q06609 339 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 TNFAIP8L3Q5GJ75 292 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 RBM48Q5RL73 367 aaKnown RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 LIPMQ5VYY2 423 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF57Q68EA5 555 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 UGT3A1Q6NUS8 523 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 UNC5BQ8IZJ1 945 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 DEPDC4Q8N2C3 294 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 BPIFB6Q8NFQ5 453 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CMASQ8NFW8 434 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SLC35F5Q8WV83 523 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 KCTD13Q8WZ19 329 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 HTRA1Q92743 480 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 TADA1Q96BN2 335 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SNRNP25Q9BV90 132 aaKnown RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 OXCT2Q9BYC2 517 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ULBP1Q9BZM6 244 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 RIBC2Q9H4K1 309 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 C11orf49Q9H6J7 331 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SP140LQ9H930 580 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SP110Q9HB58 689 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 GOLGA2P5Q9HBQ8 144 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 KRT84Q9NSB2 600 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CCDC167Q9P0B6 97 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 LEF1Q9UJU2 399 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PCDHB5Q9Y5E4 795 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 TIMM13Q9Y5L4 95 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 OTOFQ9HC10 1997 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 TCRBV9S1A1TA0A576 114 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 H3BSA7 217 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CCNT2O60583 730 aaKnown RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 IL6P05231 212 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 HSMCR30P0CW71 290 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SMARCB1Q12824 385 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PRKD1Q15139 912 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SMAD1Q15797 465 aaKnown RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ZBTB6Q15916 424 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CTXN3Q4LDR2 81 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PAN2Q504Q3 1202 aaKnown RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 C6orf183Q5T699 404 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 FRMD7Q6ZUT3 714 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 FAM131BQ86XD5 332 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CCDC28AQ8IWP9 274 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 FIBCD1Q8N539 461 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 FAM45AQ8TCE6 357 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 TUBA1CQ9BQE3 449 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms