RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 ZNF599Q96NL3 588 aa16.93■□□□□ 0.3
TOM1-210ENST00000449058 EPB41L1Q9H4G0 881 aa16.93■□□□□ 0.3
TOM1-210ENST00000449058 FBRSL1Q9HCM7 1045 aaKnown RBP16.93■□□□□ 0.3
TOM1-210ENST00000449058 ATP6AP2A0A1C7CYW4 349 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 ATP6AP2O75787 350 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 CDK14O94921 469 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 GSTT1P30711 240 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 GALNT3Q14435 633 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 TYSND1Q2T9J0 566 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 SNX31Q8N9S9 440 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 OR4L1Q8NH43 312 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 LPGAT1Q92604 370 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 TRIB3Q96RU7 358 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 AARSD1Q9BTE6 412 aaKnown RBP16.92■□□□□ 0.3
TOM1-210ENST00000449058 CATSPERZQ9NTU4 200 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 CROTQ9UKG9 612 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 DNAJC15Q9Y5T4 150 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 TANC1Q9C0D5 1861 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 THSD7BQ9C0I4 1608 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 CASP8AP2Q9UKL3 1982 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 TCRBV3S1A0A5B6 114 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 TACR2P21452 398 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 STC1P52823 247 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 CDH13P55290 713 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 PRKCZQ05513 592 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 C5orf22Q49AR2 442 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 RIN3Q8TB24 985 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 SPATA17Q96L03 361 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 FAM193BQ96PV7 902 aaPredicted RBP16.92■□□□□ 0.3
TOM1-210ENST00000449058 ATOH8Q96SQ7 321 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 TFB2MQ9H5Q4 396 aaKnown RBP16.92■□□□□ 0.3
TOM1-210ENST00000449058 AKTIPQ9H8T0 292 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 SLC27A5Q9Y2P5 690 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 AP4S1Q9Y587 144 aa16.92■□□□□ 0.3
TOM1-210ENST00000449058 H3BMM5 538 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 SRP72O76094 671 aaKnown RBP16.91■□□□□ 0.3
TOM1-210ENST00000449058 MT-CO1P00395 513 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 ZDHHC11BP0C7U3 371 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 CDKL1Q00532 357 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 RALGDSQ12967 914 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 SAMD4BQ5PRF9 694 aaKnown RBP16.91■□□□□ 0.3
TOM1-210ENST00000449058 C6orf10Q5SRN2 563 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 FAM171A1Q5VUB5 890 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 ROPN1LQ96C74 230 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 TRIM4Q9C037 500 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 CRISPLD1Q9H336 500 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 PCDHGB4Q9UN71 923 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 PCDHGB5Q9Y5G0 923 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 SMIM31A0A1B0GVY4 71 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 H0YJX3 145 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 UBXN8O00124 270 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 CA12O43570 354 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 SIX3O95343 332 aaPredicted RBP16.91■□□□□ 0.3
TOM1-210ENST00000449058 VNN2O95498 520 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 NDST3O95803 873 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 SERPINF2P08697 491 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 PIRTP0C851 137 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 ZNF26P17031 533 aaPredicted RBP16.91■□□□□ 0.3
TOM1-210ENST00000449058 HOXD9P28356 352 aaPredicted RBP16.91■□□□□ 0.3
TOM1-210ENST00000449058 STX1BP61266 288 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 MTA1Q13330 715 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 MGAT5BQ3V5L5 792 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 KANK2Q63ZY3 851 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 AHI1Q8N157 1196 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 EXT2Q93063 718 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 SLCO4A1Q96BD0 722 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 CCSER2Q9H7U1 834 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 INTS10Q9NVR2 710 aaKnown RBP16.91■□□□□ 0.3
TOM1-210ENST00000449058 COMMD8Q9NX08 183 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 SLC4A7Q9Y6M7 1214 aa16.91■□□□□ 0.3
TOM1-210ENST00000449058 MTMR11A4FU01 709 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 BBIP1A8MTZ0 92 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
TOM1-210ENST00000449058 PPP6CO00743 305 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 KIF3CO14782 793 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 RAB44Q7Z6P3 723 aaPredicted RBP16.9■□□□□ 0.3
TOM1-210ENST00000449058 PHYKPLQ8IUZ5 450 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 RYBPQ8N488 228 aaPredicted RBP16.9■□□□□ 0.3
TOM1-210ENST00000449058 CDKN2AIPNLQ96HQ2 116 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 B3GALT6Q96L58 329 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 UHRF1Q96T88 793 aaPredicted RBP16.9■□□□□ 0.3
TOM1-210ENST00000449058 MGME1Q9BQP7 344 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 SLC2A11Q9BYW1 496 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 GPR62Q9BZJ7 368 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 ZNF696Q9H7X3 374 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 MID1IP1Q9NPA3 183 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 NLE1Q9NVX2 485 aaPredicted RBP16.9■□□□□ 0.3
TOM1-210ENST00000449058 NDUFA13Q9P0J0 144 aa16.9■□□□□ 0.3
TOM1-210ENST00000449058 LRRC14BA6NHZ5 514 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 AZIN1O14977 448 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.3
TOM1-210ENST00000449058 FGFR3P22607 806 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 SLC7A1P30825 629 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 KPNA1P52294 538 aaPredicted RBP16.89■□□□□ 0.3
TOM1-210ENST00000449058 ZNF140P52738 457 aaPredicted RBP16.89■□□□□ 0.3
TOM1-210ENST00000449058 ARPP19P56211 112 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 MYBPC1Q00872 1141 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 CREB5Q02930 508 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 SREBF2Q12772 1141 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 PFKFB4Q16877 469 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms