RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 NEUROG3Q9Y4Z2 214 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 PCDHB1Q9Y5F3 818 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 ATMQ13315 3056 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 A0A0J9YYE9 177 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 ZNF487B1APH4 448 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 AQP9O43315 295 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 KRT37O76014 449 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 TRBC1P01850 177 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 TSHRP16473 764 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 NFKB1P19838 968 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 HNF1BP35680 557 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 CHRNA4P43681 627 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 RENBPP51606 427 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 THOP1P52888 689 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 PDX1P52945 283 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 NAP1L1P55209 391 aaKnown RBP10.23□□□□□ -0.77
HDLBP-216ENST00000428482 NSUN2Q08J23 767 aaKnown RBP eCLIP10.23□□□□□ -0.77
HDLBP-216ENST00000428482 CCDC15Q0P6D6 951 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 WASHC5Q12768 1159 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 MTM1Q13496 603 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 HNRNPDQ14103 355 aaKnown RBP10.23□□□□□ -0.77
HDLBP-216ENST00000428482 GRM3Q14832 879 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 CDKN3Q16667 212 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 QPCTQ16769 361 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 DNTTIP2Q5QJE6 756 aaKnown RBP10.23□□□□□ -0.77
HDLBP-216ENST00000428482 LRRC38Q5VT99 294 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 ALS2CLQ60I27 953 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 RAET1GQ6H3X3 334 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 TIGD7Q6NT04 549 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-216ENST00000428482 Q6ZVL8 140 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 KDELC2Q7Z4H8 507 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 ZC3H18Q86VM9 953 aaKnown RBP10.23□□□□□ -0.77
HDLBP-216ENST00000428482 HID1Q8IV36 788 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 SLC35F3Q8IY50 421 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 NSMCE1Q8WV22 266 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 SCAMP4Q969E2 229 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 SKA1Q96BD8 255 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 EID2BQ96D98 161 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 PBKQ96KB5 322 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 TSGA13Q96PP4 275 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 TRIB3Q96RU7 358 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 APOOQ9BUR5 198 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 ARFGAP3Q9NP61 516 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 KLQ9UEF7 1012 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 RABGEF1Q9UJ41 708 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 CDC23Q9UJX2 597 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 AMFRQ9UKV5 643 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 TTC7AQ9ULT0 858 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-216ENST00000428482 SNX12Q9UMY4 172 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 SPO11Q9Y5K1 396 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 ST14Q9Y5Y6 855 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 HS3ST3A1Q9Y663 406 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 SAR1BQ9Y6B6 198 aa10.23□□□□□ -0.77
HDLBP-216ENST00000428482 OAS3Q9Y6K5 1087 aaKnown RBP10.23□□□□□ -0.77
HDLBP-216ENST00000428482 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-216ENST00000428482 TCRBV7S2A1N4TA0A589 114 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 CCDC66A2RUB6 948 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 FADS2P1A8MWK0 482 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 DDX3YO15523 660 aaKnown RBP10.22□□□□□ -0.77
HDLBP-216ENST00000428482 MAGEC1O60732 1142 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 FUCA1P04066 466 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 MX2P20592 715 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 CCNCP24863 283 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 CTNNA2P26232 953 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 POLD2P49005 469 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 PEX5P50542 639 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 STC1P52823 247 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 KIAA1024LP59773 190 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 DAB2P98082 770 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 CDK3Q00526 305 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 INSM1Q01101 510 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-216ENST00000428482 ENPP7Q6UWV6 458 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 USP45Q70EL2 814 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 LYSMD3Q7Z3D4 306 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 RD3Q7Z3Z2 195 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 PEX26Q7Z412 305 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 MAP7D3Q8IWC1 876 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 BBS5Q8N3I7 341 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 ASB12Q8WXK4 309 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 OXNAD1Q96HP4 312 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-216ENST00000428482 CDC6Q99741 560 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 ABCG8Q9H221 673 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 WDR26Q9H7D7 661 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 PCDH9Q9HC56 1237 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 DDX56Q9NY93 547 aaKnown RBP10.22□□□□□ -0.77
HDLBP-216ENST00000428482 NLGN3Q9NZ94 848 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 APOBEC2Q9Y235 224 aaKnown RBP10.22□□□□□ -0.77
HDLBP-216ENST00000428482 R3HDM2Q9Y2K5 976 aaKnown RBP10.22□□□□□ -0.77
HDLBP-216ENST00000428482 PLEKHM1Q9Y4G2 1056 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 PCDHA3Q9Y5H8 950 aa10.22□□□□□ -0.77
HDLBP-216ENST00000428482 C1orf232A0A0U1RR37 186 aa10.21□□□□□ -0.77
HDLBP-216ENST00000428482 B4DGG1 531 aa10.21□□□□□ -0.77
HDLBP-216ENST00000428482 H3BM21 787 aa10.21□□□□□ -0.77
HDLBP-216ENST00000428482 TAF4O00268 1085 aa10.21□□□□□ -0.77
HDLBP-216ENST00000428482 AURKAO14965 403 aa10.21□□□□□ -0.77
HDLBP-216ENST00000428482 PPP1R12AO14974 1030 aaPredicted RBP10.21□□□□□ -0.77
HDLBP-216ENST00000428482 INPP4BO15327 924 aa10.21□□□□□ -0.77
HDLBP-216ENST00000428482 RASGRP1O95267 797 aa10.21□□□□□ -0.77
HDLBP-216ENST00000428482 CLDN7O95471 211 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms