RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 ABCG1P45844 678 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 DUSP3P51452 185 aaPredicted RBP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 ANXA8L1Q5VT79 327 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 CDKAL1Q5VV42 579 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 DHFR2Q86XF0 187 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 KIF2BQ8N4N8 673 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 DNASE1L2Q92874 299 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 SAMD11Q96NU1 681 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 LDAHQ9H6V9 325 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 ADH5P11766 374 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC7A2P52569 658 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 ZNF132P52740 706 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 ATP6V0D1P61421 351 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 DLG4P78352 724 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 GHRHRQ02643 423 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC13A2Q13183 592 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 CCNYL2Q5T2Q4 361 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 SNX20Q7Z614 316 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 BRI3BPQ8WY22 251 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 CENPIQ92674 756 aaPredicted RBP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 LRRC39Q96DD0 335 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 LGMNQ99538 433 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 ACBD6Q9BR61 282 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 ZNF670Q9BS34 389 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 NMUR1Q9HB89 426 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 OR2AG2A6NM03 316 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 ITGB5P18084 799 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 TFEBP19484 476 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 ITPKAP23677 461 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 PSMB9P28065 219 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 TMED10P49755 219 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 ITGA1P56199 1179 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 OTUD3Q5T2D3 398 aaPredicted RBP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 RTL4Q6ZR62 310 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 GPRIN3Q6ZVF9 776 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 AVL9Q8NBF6 648 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 KIFC1Q9BW19 673 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 LHX5Q9H2C1 402 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 AGO3Q9H9G7 860 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 CCDC177Q9NQR7 707 aaPredicted RBP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 KCND1Q9NSA2 647 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 MRPL39Q9NYK5 338 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 CCDC167Q9P0B6 97 aa9.94□□□□□ -0.82
CLTCL1-202ENST00000427926 DCLK1O15075 740 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 PECAM1P16284 738 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 ITGA2P17301 1181 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 DDX6P26196 483 aaKnown RBP eCLIP9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 PER3P56645 1201 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 EARS2Q5JPH6 523 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 ANO7Q6IWH7 933 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 TATDN1Q6P1N9 297 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 ZBTB49Q6ZSB9 765 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 CCDC103Q8IW40 242 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 KATNAL2Q8IYT4 538 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 SETD9Q8NE22 299 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 OR5B17Q8NGF7 314 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 MTMR8Q96EF0 704 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 ABCB8Q9NUT2 735 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 TRIM43BA6NCK2 446 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 DLGAP3O95886 979 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 WNT3AP56704 352 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 RAB14P61106 215 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 STXBP1P61764 594 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 PPP3CAQ08209 521 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 PRKG2Q13237 762 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 UGCGQ16739 394 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 ZC3H14Q6PJT7 736 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 ABHD15Q6UXT9 468 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 LPCAT2Q7L5N7 544 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 JAZF1Q86VZ6 243 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 GKN2Q86XP6 184 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 DNAAF5Q86Y56 855 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 TCAIMQ8N3R3 496 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 OR4A15Q8NGL6 344 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 FAM81AQ8TBF8 368 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 MDM1Q8TC05 714 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 INPP4AQ96PE3 977 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC9A7Q96T83 725 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 UNC93B1Q9H1C4 597 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 CARS2Q9HA77 564 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC2A4RGQ9NR83 387 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 DZANK1Q9NVP4 752 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 HCN4Q9Y3Q4 1203 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 TLX3O43711 291 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 TSPAN1O60635 241 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 HGFP14210 728 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 KCNA3P22001 575 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 TAS2R41P59536 307 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 FAM91A1Q658Y4 838 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 TRAF7Q6Q0C0 670 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 ULK2Q8IYT8 1036 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 DEFB119Q8N690 84 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 AUTS2Q8WXX7 1259 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 HDAC10Q969S8 669 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 APOPT1Q96IL0 206 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC25A23Q9BV35 468 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 ACE2Q9BYF1 805 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC32A1Q9H598 525 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 RPS6KA6Q9UK32 745 aa9.93□□□□□ -0.82
CLTCL1-202ENST00000427926 COG5Q9UP83 839 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms