RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 ADCY10Q96PN6 1610 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 URB1O60287 2271 aaKnown RBP7.79□□□□□ -1.16
LINC00649-203ENST00000427447 TOPBP1Q92547 1522 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 LRATO95237 230 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 GIMD1P0DJR0 217 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 NAGLUP54802 743 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 ACTA2P62736 377 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 ACTG2P63267 376 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 ACTC1P68032 377 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 ACTA1P68133 377 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 ALKBH5Q6P6C2 394 aaKnown RBP7.79□□□□□ -1.16
LINC00649-203ENST00000427447 ILDR2Q71H61 639 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 EFHBQ8N7U6 833 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 BPIFB6Q8NFQ5 453 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 LMLNQ96KR4 655 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 SLITRK1Q96PX8 696 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 C12orf57Q99622 126 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 TM6SF1Q9BZW5 370 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 MTFR1LQ9H019 292 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 OR51E2Q9H255 320 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 FOLH1BQ9HBA9 442 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 ZFYVE28Q9HCC9 887 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 TCOF1Q13428 1488 aaKnown RBP7.79□□□□□ -1.16
LINC00649-203ENST00000427447 KIAA0556O60303 1618 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 BORCS7-ASMTA0A0B4J1R7 106 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 MDFIC2A0A1B0GVS7 189 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 H0Y8G0 127 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 GPRIN2O60269 458 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 DNAJB5O75953 348 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 C6P13671 934 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 UBA1P22314 1058 aaKnown RBP7.79□□□□□ -1.16
LINC00649-203ENST00000427447 TPMTP51580 245 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 PRKAG1P54619 331 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 PTPN21Q16825 1174 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 DEFB107AQ8IZN7 70 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 FBXO39Q8N4B4 442 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 FANCBQ8NB91 859 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 PGAP3Q96FM1 320 aaPredicted RBP7.79□□□□□ -1.16
LINC00649-203ENST00000427447 SMARCD1Q96GM5 515 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 GMCL1Q96IK5 515 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 DMRTB1Q96MA1 342 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 PHOX2BQ99453 314 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 WASH6PQ9NQA3 447 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 SPANXA1Q9NS26 97 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 USP36Q9P275 1121 aaKnown RBP7.79□□□□□ -1.16
LINC00649-203ENST00000427447 SNX12Q9UMY4 172 aa7.79□□□□□ -1.16
LINC00649-203ENST00000427447 ANGEL1Q9UNK9 670 aaKnown RBP7.79□□□□□ -1.16
LINC00649-203ENST00000427447 A0A0G2JN53 185 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 IRAK2O43187 625 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 AIF1P55008 147 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 S100A10P60903 97 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 PTCHD3Q3KNS1 767 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 PAN3Q58A45 887 aaKnown RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 RIN2Q8WYP3 895 aaPredicted RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 THUMPD3Q9BV44 507 aaKnown RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 ZNF436Q9C0F3 470 aaPredicted RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 C1orf21Q9H246 121 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 CPNE5Q9HCH3 593 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 ARHGEF5Q12774 1597 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 SOWAHDA6NJG2 315 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 TCEA3O75764 348 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 PTBP3O95758 552 aaKnown RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 FTLP02792 175 aaPredicted RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 CYP1A1P04798 512 aaPredicted RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 NR4A2P43354 598 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 PTSQ03393 145 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 CNTN1Q12860 1018 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 AVPI1Q5T686 147 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 NLRP8Q86W28 1048 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 GPT2Q8TD30 523 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 PPP1R16AQ96I34 528 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 IFT27Q9BW83 186 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 TBC1D13Q9NVG8 400 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 F8W031 263 aaPredicted RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 BOLA2-SMG1P6H3BVE0 249 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 PGRP06401 933 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 PPP4CP60510 307 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 GTF2H3Q13889 308 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 WSCD2Q2TBF2 565 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 RNF220Q5VTB9 566 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 OR6B3Q8NGW1 331 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 ACTRT2Q8TDY3 377 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 RASD2Q96D21 266 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 GGT7Q9UJ14 662 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 TRAV20A0A0B4J274 112 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 CDK1P06493 297 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 RHOP08100 348 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 CYP4B1P13584 511 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 AKR1B1P15121 316 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 ITPKAP23677 461 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 CHRNA5P30532 468 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 SCARB2Q14108 478 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 PDIA5Q14554 519 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 ZNF674Q2M3X9 581 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 PLEKHN1Q494U1 663 aaPredicted RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 PAN2Q504Q3 1202 aaKnown RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 ASPRV1Q53RT3 343 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 STK35Q8TDR2 534 aa7.78□□□□□ -1.16
LINC00649-203ENST00000427447 METTL2AQ96IZ6 378 aaKnown RBP7.78□□□□□ -1.16
LINC00649-203ENST00000427447 ZIM3Q96PE6 472 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms