RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CCL4L1Q8NHW4 92 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 C9orf43Q8TAL5 461 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 APOBEC4Q8WW27 367 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PSKH2Q96QS6 385 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 LGR4Q9BXB1 951 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SLC12A9Q9BXP2 914 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TEX101Q9BY14 249 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 GANQ9H2C0 597 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PDFQ9HBH1 243 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 B4GALT6Q9UBX8 382 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SUFUQ9UMX1 484 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 EFCAB7A8K855 629 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 H3BRJ5 948 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 LOC400499M0QZD8 3231 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 INPP4BO15327 924 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CEACAM5P06731 702 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 IVLP07476 585 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CES1P23141 567 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SERPINB6P35237 376 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ADCY8P40145 1251 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CASRP41180 1078 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 JAM2P57087 298 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CDK3Q00526 305 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CTBSQ01459 385 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 UBXN1Q04323 297 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RALGDSQ12967 914 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PTP4A2Q12974 167 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SRSF6Q13247 344 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NR1D2Q14995 579 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ARMC12Q5T9G4 340 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 MARC1Q5VT66 337 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CYB5D1Q6P9G0 228 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 MON1BQ7L1V2 547 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SLC9B2Q86UD5 537 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 C17orf82Q86X59 251 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 GALNT13Q8IUC8 556 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 MCOLN2Q8IZK6 566 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SCRN2Q96FV2 425 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SLC45A3Q96JT2 553 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 COQ10AQ96MF6 247 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 OR2M4Q96R27 311 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PCDHB18PQ96TA0 734 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NUDT22Q9BRQ3 303 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 EPB41L1Q9H4G0 881 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 MRPL47Q9HD33 250 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ANKMY1Q9P2S6 941 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PCSK1NQ9UHG2 260 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NEU3Q9UQ49 428 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PCDHGC4Q9Y5F7 938 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 B3GALT1Q9Y5Z6 326 aa12.24□□□□□ -0.45
HLA-DQB3-203ENST00000425319 DOCK9Q9BZ29 2069 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 IGHV1OR21-1A0A087WYE8 117 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 OR5K4A6NMS3 321 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 HEXIM1O94992 359 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ATP1A3P13637 1013 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 LIFP15018 202 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TCN2P20062 427 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 AK4P27144 223 aaPredicted RBP12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RPL7AP62424 266 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 DPTQ07507 201 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ITKQ08881 620 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ABHD18Q0P651 414 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CLCA4Q14CN2 919 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 KRT31Q15323 416 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 BOLA3Q53S33 107 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SNAP47Q5SQN1 464 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 DOK6Q6PKX4 331 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SASS6Q6UVJ0 657 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TMCO3Q6UWJ1 677 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NLRP8Q86W28 1048 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 LRRC49Q8IUZ0 686 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 EXD1Q8NHP7 514 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NCSTNQ92542 709 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 VOPP1Q96AW1 172 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 AP2M1Q96CW1 435 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TRIM11Q96F44 468 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 DTD2Q96FN9 168 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NUDCD1Q96RS6 583 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 FUCA2Q9BTY2 467 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 FBXO8Q9NRD0 319 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ZNHIT2Q9UHR6 403 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SCINQ9Y6U3 715 aa12.23□□□□□ -0.45
HLA-DQB3-203ENST00000425319 COL6A6A6NMZ7 2263 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 A8MU76 341 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TRAFD1O14545 582 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 POLR1CO15160 346 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PPM1DO15297 605 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 GP1BBP13224 206 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ZNF30P17039 623 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CDH6P55285 790 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 MC2RQ01718 297 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NKAIN2Q5VXU1 208 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 WDR74Q6RFH5 385 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ZSWIM9Q86XI8 627 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NRROSQ86YC3 692 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PLXDC1Q8IUK5 500 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NAGSQ8N159 534 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ESX1Q8N693 406 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TEX19Q8NA77 164 aa12.22□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SPOCK2Q92563 424 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms