RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 C19orf60Q96EN9 201 aa9.26□□□□□ -0.93
NUP43-204ENST00000403890 CPXM1Q96SM3 734 aa9.26□□□□□ -0.93
NUP43-204ENST00000403890 NPY6RQ99463 290 aa9.26□□□□□ -0.93
NUP43-204ENST00000403890 SLC38A3Q99624 504 aa9.26□□□□□ -0.93
NUP43-204ENST00000403890 WDR26Q9H7D7 661 aa9.26□□□□□ -0.93
NUP43-204ENST00000403890 SUDS3Q9H7L9 328 aaPredicted RBP9.26□□□□□ -0.93
NUP43-204ENST00000403890 TMEM51Q9NW97 253 aa9.26□□□□□ -0.93
NUP43-204ENST00000403890 USP25Q9UHP3 1055 aa9.26□□□□□ -0.93
NUP43-204ENST00000403890 CNTN6Q9UQ52 1028 aa9.26□□□□□ -0.93
NUP43-204ENST00000403890 PCDHGB7Q9Y5F8 929 aa9.26□□□□□ -0.93
NUP43-204ENST00000403890 ZNF106Q9H2Y7 1883 aaKnown RBP9.25□□□□□ -0.93
NUP43-204ENST00000403890 HEATR9A2RTY3 570 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 ANKUB1A6NFN9 424 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 PMM2O15305 246 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 SLC16A3O15427 465 aaKnown RBP9.25□□□□□ -0.93
NUP43-204ENST00000403890 TEX33O43247 280 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 THAP12O43422 761 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 DAB1O75553 588 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 IGSF6O95976 241 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 FUCA1P04066 466 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 KRT5P13647 590 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 ZNF28P17035 718 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 TFE3P19532 575 aaPredicted RBP9.25□□□□□ -0.93
NUP43-204ENST00000403890 CASP14P31944 242 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 MMP12P39900 470 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 FMO5P49326 533 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 CTBSQ01459 385 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 GCNT1Q02742 428 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 DEUP1Q05D60 604 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 DNASE1L3Q13609 305 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 ELOAQ14241 798 aaKnown RBP9.25□□□□□ -0.93
NUP43-204ENST00000403890 CHRNA6Q15825 494 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 OTUD1Q5VV17 481 aaPredicted RBP9.25□□□□□ -0.93
NUP43-204ENST00000403890 SLC6A19Q695T7 634 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 OLFML1Q6UWY5 402 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 SLC26A9Q7LBE3 791 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 ZNF761Q86XN6 746 aaPredicted RBP9.25□□□□□ -0.93
NUP43-204ENST00000403890 HPS6Q86YV9 775 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 SEC14L1Q92503 715 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 NCSTNQ92542 709 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 PNPLA2Q96AD5 504 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 SNRNP40Q96DI7 357 aaKnown RBP9.25□□□□□ -0.93
NUP43-204ENST00000403890 STAMBPL1Q96FJ0 436 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 PGAP3Q96FM1 320 aaPredicted RBP9.25□□□□□ -0.93
NUP43-204ENST00000403890 ING2Q9H160 280 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 MAGEH1Q9H213 219 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 ACSS2Q9NR19 701 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 PPARGC1AQ9UBK2 798 aaKnown RBP9.25□□□□□ -0.93
NUP43-204ENST00000403890 ARMCX3Q9UH62 379 aaPredicted RBP9.25□□□□□ -0.93
NUP43-204ENST00000403890 ITGB1BP2Q9UKP3 347 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 PADI1Q9ULC6 663 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 STAP1Q9ULZ2 295 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 PCDHGC3Q9UN70 934 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 CSMD2Q7Z408 3487 aa9.25□□□□□ -0.93
NUP43-204ENST00000403890 A0A1B0GTL3 188 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 TSPAN11A1L157 253 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 ZSCAN5CA6NGD5 496 aaPredicted RBP9.24□□□□□ -0.93
NUP43-204ENST00000403890 INSIG1O15503 277 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 BUB1O43683 1085 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 TMCC1O94876 653 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 PIGNO95427 931 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 CEACAM5P06731 702 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 MYCLP1P12525 358 aaPredicted RBP9.24□□□□□ -0.93
NUP43-204ENST00000403890 GARSP41250 739 aaKnown RBP9.24□□□□□ -0.93
NUP43-204ENST00000403890 GNPDA1P46926 289 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 FASLGP48023 281 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 PER3P56645 1201 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 SNX16P57768 344 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 RNASE9P60153 205 aaKnown RBP9.24□□□□□ -0.93
NUP43-204ENST00000403890 RHOAP61586 193 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 FKBP3Q00688 224 aaKnown RBP9.24□□□□□ -0.93
NUP43-204ENST00000403890 SLC6A3Q01959 620 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 FOXM1Q08050 763 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 CETN1Q12798 172 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 UGT8Q16880 541 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 CFAP58Q5T655 872 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 CPZQ66K79 652 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 PNCKQ6P2M8 343 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 BRAT1Q6PJG6 821 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 FAM183BPQ6ZVS7 135 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 ARHGEF19Q8IW93 802 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 RHOT1Q8IXI2 618 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 WDTC1Q8N5D0 677 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 ZNF397Q8NF99 534 aaPredicted RBP9.24□□□□□ -0.93
NUP43-204ENST00000403890 LMO3Q8TAP4 145 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 CASKIN2Q8WXE0 1202 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 NT5C3BQ969T7 300 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 KREMEN1Q96MU8 473 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 NCAPGQ9BPX3 1015 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 SUV39H2Q9H5I1 410 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 RETREG1Q9H6L5 497 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 ASF1BQ9NVP2 202 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.24□□□□□ -0.93
NUP43-204ENST00000403890 ATP8A1Q9Y2Q0 1164 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 ST14Q9Y5Y6 855 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 NIPBLQ6KC79 2804 aaeCLIP9.24□□□□□ -0.93
NUP43-204ENST00000403890 DOCK4Q8N1I0 1966 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 PKDREJQ9NTG1 2253 aa9.24□□□□□ -0.93
NUP43-204ENST00000403890 ANKHD1Q8IWZ3 2542 aaKnown RBP9.24□□□□□ -0.93
NUP43-204ENST00000403890 TRBV23OR9-2A0A075B6M9 112 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms