RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 CNPPD1Q9BV87 410 aa3.83□□□□□ -1.8
UBE3A-202ENST00000397954 ZYG11BQ9C0D3 744 aa3.83□□□□□ -1.8
UBE3A-202ENST00000397954 PABPC3Q9H361 631 aaKnown RBP3.83□□□□□ -1.8
UBE3A-202ENST00000397954 SYNCQ9H7C4 482 aa3.83□□□□□ -1.8
UBE3A-202ENST00000397954 TRPC7Q9HCX4 862 aa3.83□□□□□ -1.8
UBE3A-202ENST00000397954 SLC39A10Q9ULF5 831 aa3.83□□□□□ -1.8
UBE3A-202ENST00000397954 CA14Q9ULX7 337 aa3.83□□□□□ -1.8
UBE3A-202ENST00000397954 TMEM98Q9Y2Y6 226 aa3.83□□□□□ -1.8
UBE3A-202ENST00000397954 HS3ST3A1Q9Y663 406 aa3.83□□□□□ -1.8
UBE3A-202ENST00000397954 CSNK1G3Q9Y6M4 447 aa3.83□□□□□ -1.8
UBE3A-202ENST00000397954 NUP205Q92621 2012 aa3.83□□□□□ -1.8
UBE3A-202ENST00000397954 LRP4O75096 1905 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 C2CD4BA6NLJ0 364 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 M0R082 166 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 CYP26A1O43174 497 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SYNCRIPO60506 623 aaKnown RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 TULP3O75386 442 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 RPP40O75818 363 aaKnown RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 NDST3O95803 873 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SERPINF2P08697 491 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 H2AFZP0C0S5 128 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 RAB6AP20340 208 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 AOAHP28039 575 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 HOXD9P28356 352 aaPredicted RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SERPINF1P36955 418 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SEC24CP53992 1094 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 AP1S1P61966 158 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 YPEL5P62699 121 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 UBXN1Q04323 297 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ELP6Q0PNE2 266 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 GPR19Q15760 415 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 HNRNPA1L2Q32P51 320 aaKnown RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 DAB2IPQ5VWQ8 1189 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 AFMIDQ63HM1 303 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SPECC1LQ69YQ0 1117 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 TXNDC8Q6A555 127 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 C11orf63Q6NUN7 778 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SCARA5Q6ZMJ2 495 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 H2AFVQ71UI9 128 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SYT12Q8IV01 421 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 DMRTC2Q8IXT2 367 aaPredicted RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 MAML2Q8IZL2 1156 aaPredicted RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ZNF417Q8TAU3 575 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PIP4K2CQ8TBX8 421 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ZNF566Q969W8 418 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 MAELQ96JY0 434 aaKnown RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ZSWIM3Q96MP5 696 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ZNF587Q96SQ5 575 aaPredicted RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 VAT1Q99536 393 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 HEPHQ9BQS7 1158 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ZNF670Q9BS34 389 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 BBS2Q9BXC9 721 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ACE2Q9BYF1 805 aaPredicted RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PDCL3Q9H2J4 239 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 RXFP3Q9NSD7 469 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 RBM12Q9NTZ6 932 aaKnown RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 IRAK4Q9NWZ3 460 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ELOVL2Q9NXB9 296 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 HPCAL4Q9UM19 191 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 NAALADL1Q9UQQ1 740 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 TRANK1O15050 2925 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 TECTAO75443 2155 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 A0A1B0GTW7 788 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 BCLAF3A2AJT9 711 aaKnown RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 C2orf78A6NCI8 922 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PGPEP1LA6NFU8 196 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ARHGAP42A6NI28 874 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 HACD1B0YJ81 288 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 FRS3O43559 492 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PSTPIP1O43586 416 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ATP2C2O75185 946 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SOAT2O75908 522 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 RNF8O76064 485 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PAMP19021 973 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 MX2P20592 715 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 CD6P30203 668 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SLC7A1P30825 629 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ACTN2P35609 894 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 CYLC1P35663 651 aaPredicted RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 CETN2P41208 172 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 NR2C2P49116 596 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 MAN2A2P49641 1150 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PEX5P50542 639 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 VCPP55072 806 aaKnown RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 NTHL1P78549 312 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PRR20EP86478 221 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PRR20CP86479 221 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PRR20DP86480 221 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PRR20BP86481 221 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 PRR20AP86496 221 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 DEUP1Q05D60 604 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 MALLQ13021 153 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SEMA3BQ13214 749 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 ZNF177Q13360 481 aaPredicted RBP3.82□□□□□ -1.8
UBE3A-202ENST00000397954 LSAMPQ13449 338 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 SPARCL1Q14515 664 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 DPYSL2Q16555 572 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 MFSD4BQ5TF39 518 aa3.82□□□□□ -1.8
UBE3A-202ENST00000397954 KLHL10Q6JEL2 608 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms