RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SDHDO14521 159 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 HOXC8P31273 242 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 GRSF1Q12849 480 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PGS1Q32NB8 556 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ZFP69Q49AA0 526 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 FAM98BQ52LJ0 330 aaKnown RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SFT2D3Q587I9 215 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TRIQKQ629K1 86 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 MAP1SQ66K74 1059 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PLEKHM3Q6ZWE6 761 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 FAM131BQ86XD5 332 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ERI1Q8IV48 349 aaKnown RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 FAM9CQ8IZT9 166 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 STX19Q8N4C7 294 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 MINDY1Q8N5J2 469 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 OR52E4Q8NGH9 312 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 GPR78Q96P69 363 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 POMKQ9H5K3 350 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ACSS2Q9NR19 701 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 KLHL3Q9UH77 587 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF232Q9UNY5 417 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 KRT6BP04259 564 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 CDK9P50750 372 aaKnown RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 RAB10P61026 200 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ABATP80404 500 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 IKBKEQ14164 716 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF423Q2M1K9 1284 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PDZK1Q5T2W1 519 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 NSMCE2Q96MF7 247 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TUBA1CQ9BQE3 449 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 C20orf27Q9GZN8 174 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 CLEC4MQ9H2X3 399 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 GLOD4Q9HC38 313 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SPAG4Q9NPE6 437 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TMEM161AQ9NX61 479 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ANAPC2Q9UJX6 822 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SMCHD1A6NHR9 2005 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TOR1BO14657 336 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ZBTB24O43167 697 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 MFSD11O43934 449 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SNAP91O60641 907 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 IDO1P14902 403 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 OGNP20774 298 aaKnown RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 LEPRP48357 1165 aaKnown RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 RENBPP51606 427 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 BLVRAP53004 296 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 C9orf57Q5W0N0 161 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ALKAL1Q6UXT8 129 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 RNF111Q6ZNA4 994 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 C10orf107Q8IVU9 208 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 CLYBLQ8N0X4 340 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TMEM151AQ8N4L1 468 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TMEM102Q8N9M5 508 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PDPRQ8NCN5 879 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 LGMNQ99538 433 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 CDH9Q9ULB4 789 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SPEF1Q9Y4P9 236 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TMEM247A6NEH6 219 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 CCRL2O00421 344 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ENO2P09104 434 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PSMA3P25788 255 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 IFNA8P32881 189 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 CCT8P50990 548 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SLC10A2Q12908 348 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 DGKKQ5KSL6 1271 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 RNF165Q6ZSG1 346 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ERMP1Q7Z2K6 904 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 GATAD2AQ86YP4 633 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 CENPSQ8N2Z9 138 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SNX31Q8N9S9 440 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 DNAJB8Q8NHS0 232 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ELMO1Q92556 727 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PIWIL1Q96J94 861 aaKnown RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 APOL4Q9BPW4 351 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 RNF38Q9H0F5 515 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SLC25A51Q9H1U9 297 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 MAGEE1Q9HCI5 957 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ABCD2Q9UBJ2 740 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 WBP11Q9Y2W2 641 aaKnown RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TPRKBQ9Y3C4 175 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TFECO14948 347 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SLC35E2BP0CK96 405 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TPH1P17752 444 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PFKPQ01813 784 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 FAM45BPQ6NSW5 357 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 FBXO27Q8NI29 283 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 FAM45AQ8TCE6 357 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PPP1R10Q96QC0 940 aaKnown RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 KCTD15Q96SI1 283 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 C16orf70Q9BSU1 422 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 WDR55Q9H6Y2 383 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SDR39U1Q9NRG7 319 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 COMMD8Q9NX08 183 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 HMGXB4Q9UGU5 601 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PCDHGA3Q9Y5H0 932 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 CCDC182A6NF36 153 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 DLX3O60479 287 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 IFI30P13284 250 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 THOP1P52888 689 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 IST1P53990 364 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms