RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 TUBB6Q9BUF5 446 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 TNKS2Q9H2K2 1166 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 STN1Q9H668 368 aaKnown RBP10.97□□□□□ -0.65
CASP3-202ENST00000393585 WDR55Q9H6Y2 383 aaPredicted RBP10.97□□□□□ -0.65
CASP3-202ENST00000393585 FAM50BQ9Y247 325 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 A8MT66 165 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 TMEM233B4DJY2 109 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 STX7O15400 261 aaKnown RBP10.97□□□□□ -0.65
CASP3-202ENST00000393585 ZBTB14O43829 449 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 HNRNPCL1O60812 293 aaKnown RBP10.97□□□□□ -0.65
CASP3-202ENST00000393585 JUNP05412 331 aaKnown RBP10.97□□□□□ -0.65
CASP3-202ENST00000393585 ATP5F1P24539 256 aaPredicted RBP10.97□□□□□ -0.65
CASP3-202ENST00000393585 MC4RP32245 332 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 IRS1P35568 1242 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 BMPR1AP36894 532 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 RPL14P50914 215 aaKnown RBP10.97□□□□□ -0.65
CASP3-202ENST00000393585 CLCN4P51793 760 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 PFKPQ01813 784 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 TYSND1Q2T9J0 566 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 PLEKHG6Q3KR16 790 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 FAM219BQ5XKK7 198 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 RETSATQ6NUM9 610 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 EPGNQ6UW88 154 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 TRIM67Q6ZTA4 783 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 CPXM2Q8N436 756 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 POU5F2Q8N7G0 328 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 PAF1Q8N7H5 531 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 MRPL43Q8N983 215 aaKnown RBP10.97□□□□□ -0.65
CASP3-202ENST00000393585 PTERQ96BW5 349 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 NUF2Q9BZD4 464 aa10.97□□□□□ -0.65
CASP3-202ENST00000393585 B2RBV5 119 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 GSC2O15499 205 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 BNIP3LO60238 219 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 FZD6O60353 706 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 SP100P23497 879 aaPredicted RBP10.96□□□□□ -0.65
CASP3-202ENST00000393585 EPHA3P29320 983 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 CTSOP43234 321 aaPredicted RBP10.96□□□□□ -0.65
CASP3-202ENST00000393585 STK19P49842 368 aaPredicted RBP10.96□□□□□ -0.65
CASP3-202ENST00000393585 PRKAA2P54646 552 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 RIPK1Q13546 671 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 ACAP2Q15057 778 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 TEAD2Q15562 447 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 ZRANB3Q5FWF4 1079 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 ISCA2Q86U28 154 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 TTC30BQ8N4P2 665 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 TEX9Q8N6V9 391 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 AGAP11Q8TF27 550 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 EID2BQ96D98 161 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 AARSD1Q9BTE6 412 aaKnown RBP10.96□□□□□ -0.65
CASP3-202ENST00000393585 ABCB8Q9NUT2 735 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.96□□□□□ -0.65
CASP3-202ENST00000393585 NCKIPSDQ9NZQ3 722 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 TAGLN3Q9UI15 199 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 FIS1Q9Y3D6 152 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 IRAK3Q9Y616 596 aa10.96□□□□□ -0.65
CASP3-202ENST00000393585 MEI4A8MW99 385 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 MATN2O00339 956 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 OR1I1O60431 355 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 NDUFS3O75489 264 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 ARHGEF15O94989 841 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 ATP5BP06576 529 aaKnown RBP10.96□□□□□ -0.66
CASP3-202ENST00000393585 RBP1P09455 135 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 ZNF37AP17032 561 aaPredicted RBP10.96□□□□□ -0.66
CASP3-202ENST00000393585 NTHL1P78549 312 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 PRKAA1Q13131 559 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 PDAP1Q13442 181 aaKnown RBP10.96□□□□□ -0.66
CASP3-202ENST00000393585 PEX6Q13608 980 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 PDCD2Q16342 344 aaPredicted RBP10.96□□□□□ -0.66
CASP3-202ENST00000393585 SLC5A9Q2M3M2 681 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 ZNF697Q5TEC3 545 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 SEL1L3Q68CR1 1132 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 LYSMD3Q7Z3D4 306 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 PHTF2Q8N3S3 785 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 RBM15BQ8NDT2 890 aaKnown RBP10.96□□□□□ -0.66
CASP3-202ENST00000393585 SPPL3Q8TCT6 385 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 LPGAT1Q92604 370 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 ACDQ96AP0 544 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 MYO19Q96H55 970 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 G3BP2Q9UN86 482 aaKnown RBP10.96□□□□□ -0.66
CASP3-202ENST00000393585 ZNF510Q9Y2H8 683 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 MED16Q9Y2X0 877 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 L3MBTL1Q9Y468 752 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 SLC4A7Q9Y6M7 1214 aa10.96□□□□□ -0.66
CASP3-202ENST00000393585 ALPK3Q96L96 1907 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 MTCL1Q9Y4B5 1905 aaKnown RBP10.95□□□□□ -0.66
CASP3-202ENST00000393585 H3BMM5 538 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 HDAC3O15379 428 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 GRID2O43424 1007 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 DCXO43602 365 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 MOSPD3O75425 235 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 SRP72O76094 671 aaKnown RBP10.95□□□□□ -0.66
CASP3-202ENST00000393585 IPO13O94829 963 aaKnown RBP10.95□□□□□ -0.66
CASP3-202ENST00000393585 RHOBTB1O94844 696 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 MYOGP15173 224 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 CD1DP15813 335 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 EPCAMP16422 314 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 GM2AP17900 193 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 HLA-FP30511 346 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 MNAT1P51948 309 aa10.95□□□□□ -0.66
CASP3-202ENST00000393585 PTPRNQ16849 979 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms