RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 C9IYK1 514 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 GMDSO60547 372 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 IL7P13232 177 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 CYP2A7P20853 494 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 DNASE1L3Q13609 305 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 LCN1P1Q5VSP4 162 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 NETO2Q8NC67 525 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 TCF12Q99081 682 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 MID1IP1Q9NPA3 183 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 ZMYM2Q9UBW7 1377 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 CASZ1Q86V15 1759 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 UBE2QL1A1L167 161 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 TBC1D3BA6NDS4 549 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 NT5C1B-RDH14C9J2C7 533 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 BTN3A1O00481 513 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 TM7SF2O76062 418 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 TSPAN19P0C672 248 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 SCN1BQ07699 218 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 BNIP3Q12983 259 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 TGFBIQ15582 683 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 PKN2Q16513 984 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 UGCGQ16739 394 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 TYW3Q6IPR3 259 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 DENND1CQ8IV53 801 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 CCDC120Q96HB5 630 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 RIBC2Q9H4K1 309 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 BIN3Q9NQY0 253 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 VTI1BQ9UEU0 232 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 UBQLN2Q9UHD9 624 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 PEX16Q9Y5Y5 336 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 CLDN5O00501 218 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 DYRK3O43781 588 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 MPOP05164 745 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 CNTFP26441 200 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 TMEM26Q6ZUK4 368 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 CLIP4Q8N3C7 705 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 FBXO39Q8N4B4 442 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 BPIFB6Q8NFQ5 453 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 UXTQ9UBK9 157 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 UBDO15205 165 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 SPATA31D3P0C874 917 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 SP3Q02447 781 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 TSNQ15631 228 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 GRTP1Q5TC63 336 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 RFWD3Q6PCD5 774 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 SPATA31D4Q6ZUB0 917 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 KCTD8Q6ZWB6 473 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 RBM23Q86U06 439 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 TCP10LQ8TDR4 215 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 BPIFA1Q9NP55 256 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 KCNMB3Q9NPA1 279 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 COQ3Q9NZJ6 369 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 COL3A1P02461 1466 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 UNCXA6NJT0 531 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 PABPC4LP0CB38 370 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 CTNNB1P35222 781 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 CLK2P49760 499 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 CAPSQ13938 189 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 MPP7Q5T2T1 576 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 OGFOD2Q6N063 350 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 PGM2L1Q6PCE3 622 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 DNAJC14Q6Y2X3 702 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 APBB2Q92870 758 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 ABCC13Q9NSE7 274 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 NINJ2Q9NZG7 142 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 OR12D3Q9UGF7 316 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 FAM50BQ9Y247 325 aa11.09□□□□□ -0.63
SMARCE1-202ENST00000348513 PEX10O60683 326 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 PEX2P28328 305 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 HNF1BP35680 557 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 BNIP2Q12982 314 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 PLEKHG6Q3KR16 790 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 FAM92BQ6ZTR7 304 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 FNDC5Q8NAU1 212 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 GSTCDQ8NEC7 633 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 TBCBQ99426 244 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 RACGAP1Q9H0H5 632 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 WDR41Q9HAD4 459 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 SACM1LQ9NTJ5 587 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 TMEM131LA2VDJ0 1609 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 A0A096LPK6 155 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 H6PDO95479 791 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF7P17097 686 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 TYMPP19971 482 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 PSMB4P28070 264 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 CD83Q01151 205 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 IL17AQ16552 155 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 SETMARQ53H47 684 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 SMUG1Q53HV7 270 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 FKBP1CQ5VVH2 108 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 TCEAL6Q6IPX3 200 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF517Q6ZMY9 492 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 ECHDC2Q86YB7 292 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 RNFT2Q96EX2 444 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 SEPHS2Q99611 448 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 POMKQ9H5K3 350 aa11.08□□□□□ -0.64
SMARCE1-202ENST00000348513 WASF2Q9Y6W5 498 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms