RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ATPAF2Q8N5M1 289 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 PCDH20Q8N6Y1 951 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 OR2T34Q8NGX1 318 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 OR2T3Q8NH03 318 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 PPWD1Q96BP3 646 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 FAM193BQ96PV7 902 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 ADI1Q9BV57 179 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 TASP1Q9H6P5 420 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 CCM2LQ9NUG4 571 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 TRMT13Q9NUP7 481 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 SMOXQ9NWM0 555 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 SRRDQ9UH36 339 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 TLK1Q9UKI8 766 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 SCML2Q9UQR0 700 aa10.83□□□□□ -0.68
CHRNA1-201ENST00000261007 FRMPD3Q5JV73 1810 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 ZCWPW2A0A1B0GU75 182 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 A0A1W2PPW3 197 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 E2F8A0AVK6 867 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 PRORSD1PA6NEY8 169 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 AQP12BA6NM10 295 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 WASH4PA8MWX3 477 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 TARM1B6A8C7 271 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 KPNA4O00629 521 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 DLGAP1O14490 977 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 EIF2S1P05198 315 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 SBK3P0C264 359 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 JUNBP17275 347 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 CKMT2P17540 419 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 PRAMEP78395 509 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 SMARCB1Q12824 385 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 C6orf10Q5SRN2 563 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 MANEALQ5VSG8 457 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 GPR107Q5VW38 600 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 FAM117BQ6P1L5 589 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 ABRAXAS1Q6UWZ7 409 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 GK5Q6ZS86 529 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 FRA10AC1Q70Z53 315 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 MON1AQ86VX9 555 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 AQP12AQ8IXF9 295 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 OR52K1Q8NGK4 314 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 PXYLP1Q8TE99 480 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 PTCD2Q8WV60 388 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 SEPT8Q92599 483 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 FATE1Q969F0 183 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 ZNF669Q96BR6 464 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 SLC45A3Q96JT2 553 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 PPP1R36Q96LQ0 422 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 C1orf74Q96LT6 269 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 FCRL5Q96RD9 977 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 CFHR5Q9BXR6 569 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 RHOBTB2Q9BYZ6 727 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 TRIM15Q9C019 465 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 ATAD3AQ9NVI7 634 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 RIC8BQ9NVN3 520 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 COMMD8Q9NX08 183 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 SCHIP1Q9P0W5 487 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 CROTQ9UKG9 612 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 DOLKQ9UPQ8 538 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 TRIM17Q9Y577 477 aa10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 GPC6Q9Y625 555 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-201ENST00000261007 OR6C75A6NL08 312 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 CFAP99D6REC4 459 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 GOLGA8TH3BQL2 631 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 CNOT3O75175 753 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TIPRLO75663 272 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 SRP72O76094 671 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 NFKB1P19838 968 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 CCNA2P20248 432 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 GEMP55040 296 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TUBA3CQ13748 450 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 NR1D2Q14995 579 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 PSMD5Q16401 504 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 FGD3Q5JSP0 725 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 OGFOD2Q6N063 350 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 XKR5Q6UX68 686 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 SPRED1Q7Z699 444 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 AFAP1L2Q8N4X5 818 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 MINDY2Q8NBR6 621 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 HASPINQ8TF76 798 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 DPF3Q92784 378 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TANKQ92844 425 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 ACDQ96AP0 544 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 VPS39Q96JC1 886 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 GPR22Q99680 433 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 SLC25A23Q9BV35 468 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 CEP41Q9BYV8 373 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 CAB39LQ9H9S4 337 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 POLR1BQ9H9Y6 1135 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 OLA1Q9NTK5 396 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TBC1D13Q9NVG8 400 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 TMEM161AQ9NX61 479 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 ZNF638Q14966 1978 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 MATN3O15232 486 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 CPNE6O95741 557 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 JUNP05412 331 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 SNRPB2P08579 225 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 IL10P22301 178 aa10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 CD68P34810 354 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-201ENST00000261007 ATP4BP51164 291 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms