RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 SMC4Q9NTJ3 1288 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 NLKQ9UBE8 527 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 DERAQ9Y315 318 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 RRP7AQ9Y3A4 280 aaKnown RBP5.06□□□□□ -1.6
TRA2B-201ENST00000259043 HTTP42858 3142 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 SZT2Q5T011 3432 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 TSPAN3O60637 253 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 CELF2O95319 508 aaKnown RBP5.05□□□□□ -1.6
TRA2B-201ENST00000259043 PAPSS2O95340 614 aaPredicted RBP5.05□□□□□ -1.6
TRA2B-201ENST00000259043 PPP1R3DO95685 299 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 TGFB3P10600 412 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 PTPN9P43378 593 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 RXRGP48443 463 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 ARHGAP8P85298 464 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 CHRNDQ07001 517 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 DSC1Q08554 894 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 TRAF3Q13114 568 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 IL13RA2Q14627 380 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 RPE65Q16518 533 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 TDRD12Q587J7 1177 aaKnown RBP5.05□□□□□ -1.6
TRA2B-201ENST00000259043 RUNDC3AQ59EK9 446 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 NADSYN1Q6IA69 706 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 CAPRIN2Q6IMN6 1127 aaKnown RBP5.05□□□□□ -1.6
TRA2B-201ENST00000259043 DSTYKQ6XUX3 929 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 OR4N2Q8NGD1 307 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 CXorf56Q9H5V9 222 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 CHODLQ9H9P2 273 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 IRAK4Q9NWZ3 460 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 IL36RNQ9UBH0 155 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 FBXO40Q9UH90 709 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 CD207Q9UJ71 328 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 TRIOBPQ9H2D6 2365 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 A0A0C4DFX4 3053 aa5.05□□□□□ -1.6
TRA2B-201ENST00000259043 CENPFP49454 3210 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 HEG1Q9ULI3 1381 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 OR6C68A6NDL8 312 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 ACOT8O14734 319 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 ZNF12P17014 697 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 PIP4K2AP48426 406 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-201ENST00000259043 AMTP48728 403 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 KIF5AQ12840 1032 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 FOXD4Q12950 439 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-201ENST00000259043 PDE1CQ14123 709 aaPredicted RBP5.04□□□□□ -1.6
TRA2B-201ENST00000259043 MTHFSDQ2M296 383 aaKnown RBP5.04□□□□□ -1.6
TRA2B-201ENST00000259043 AP5B1Q2VPB7 878 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 CTXN3Q4LDR2 81 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 ZNF628Q5EBL2 1059 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 SH2D4BQ5SQS7 431 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 ATG9BQ674R7 924 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 GJB7Q6PEY0 223 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 C4orf50Q6ZRC1 276 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 BBS12Q6ZW61 710 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 RBFAQ8N0V3 343 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 NME8Q8N427 588 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 LMO3Q8TAP4 145 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 HTRA1Q92743 480 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 HVCN1Q96D96 273 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 TWNKQ96RR1 684 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 CTDSP1Q9GZU7 261 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 RNF186Q9NXI6 227 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 CLDN16Q9Y5I7 305 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 LAMB4A4D0S4 1761 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 ABCC12Q96J65 1359 aa5.04□□□□□ -1.6
TRA2B-201ENST00000259043 DDX60Q8IY21 1712 aaKnown RBP5.03□□□□□ -1.6
TRA2B-201ENST00000259043 BAIAP3O94812 1187 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 STARD3NLO95772 234 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 CD4P01730 458 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 CNPP09543 421 aaKnown RBP5.03□□□□□ -1.6
TRA2B-201ENST00000259043 KRT10P13645 584 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 ITGB8P26012 769 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 SKIV2L2P42285 1042 aaKnown RBP5.03□□□□□ -1.6
TRA2B-201ENST00000259043 NUDT6P53370 316 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 NFATC4Q14934 902 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 CRY2Q49AN0 593 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 CBWD5Q5RIA9 395 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 NAA35Q5VZE5 725 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 NAPEPLDQ6IQ20 393 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 MZT2BQ6NZ67 158 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 FAM180BQ6P0A1 224 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 C1orf122Q6ZSJ8 110 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 TMC8Q8IU68 726 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 NCSTNQ92542 709 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 TMEM18Q96B42 140 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 MSTO1Q9BUK6 570 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 ATP8A2Q9NTI2 1148 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 TMEM160Q9NX00 188 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 SRPRBQ9Y5M8 271 aaKnown RBP5.03□□□□□ -1.6
TRA2B-201ENST00000259043 USP16Q9Y5T5 823 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 BRCA2P51587 3418 aa5.03□□□□□ -1.6
TRA2B-201ENST00000259043 TCF20Q9UGU0 1960 aaKnown RBP5.03□□□□□ -1.6
TRA2B-201ENST00000259043 PAPPA2Q9BXP8 1791 aa5.02□□□□□ -1.61
TRA2B-201ENST00000259043 B4E171 279 aa5.02□□□□□ -1.61
TRA2B-201ENST00000259043 FAM157AC9JC47 383 aa5.02□□□□□ -1.61
TRA2B-201ENST00000259043 STX16-NPEPL1H3BU86 382 aa5.02□□□□□ -1.61
TRA2B-201ENST00000259043 STX16O14662 325 aa5.02□□□□□ -1.61
TRA2B-201ENST00000259043 STRNO43815 780 aa5.02□□□□□ -1.61
TRA2B-201ENST00000259043 DHX16O60231 1041 aaKnown RBP5.02□□□□□ -1.61
TRA2B-201ENST00000259043 MMP3P08254 477 aa5.02□□□□□ -1.61
TRA2B-201ENST00000259043 IFIT1P09914 478 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms