RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 LRCH3Q96II8 777 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 GPATCH1Q9BRR8 931 aaKnown RBP15.23■□□□□ 0.03
DDX56-201ENST00000258772 TMEM79Q9BSE2 394 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 UPF3AQ9H1J1 476 aaKnown RBP15.23■□□□□ 0.03
DDX56-201ENST00000258772 MID1IP1Q9NPA3 183 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 PCDHB8Q9UN66 801 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 PTGDR2Q9Y5Y4 395 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 ARHGAP10A1A4S6 786 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 ZNF839A8K0R7 811 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 TIPRLO75663 272 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 MTHFD2P13995 350 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 GRIA3P42263 894 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 GPR15P49685 360 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 RPS6KA3P51812 740 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 NME5P56597 212 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 MAP7D1Q3KQU3 841 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 FBXL22Q6P050 247 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 TSPAN14Q8NG11 270 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 GPR150Q8NGU9 434 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 DNAJC1Q96KC8 554 aaKnown RBP15.23■□□□□ 0.03
DDX56-201ENST00000258772 ARMC1Q9NVT9 282 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 NDUFAF1Q9Y375 327 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 ARL5AQ9Y689 179 aa15.23■□□□□ 0.03
DDX56-201ENST00000258772 LRRC14BA6NHZ5 514 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 UBXN8O00124 270 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 AZIN1O14977 448 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 GJB3O75712 270 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 BMP2P12643 396 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 CKMT2P17540 419 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 FOXA1P55317 472 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 PRKCQQ04759 706 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 IL10RBQ08334 325 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 EFEMP1Q12805 493 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 LAMB3Q13751 1172 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 SEMA3AQ14563 771 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 POLD3Q15054 466 aaPredicted RBP15.22■□□□□ 0.03
DDX56-201ENST00000258772 OR4D1Q15615 310 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 PFKFB4Q16877 469 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 ZBTB49Q6ZSB9 765 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 ATP6V0D2Q8N8Y2 350 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 ANKFN1Q8N957 763 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 BLOC1S5Q8TDH9 187 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 TWIST2Q8WVJ9 160 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 ZUFSPQ96AP4 578 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 SEMA3CQ99985 751 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 HOPXQ9BPY8 73 aaPredicted RBP15.22■□□□□ 0.03
DDX56-201ENST00000258772 SYT17Q9BSW7 474 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 FBXO44Q9H4M3 255 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 OCEL1Q9H607 264 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.22■□□□□ 0.03
DDX56-201ENST00000258772 GIMAP2Q9UG22 337 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 CCDC162PA2VCL2 907 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 H3BSA7 217 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 NR5A2O00482 541 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 NME4O00746 187 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 PIP5K1BO14986 540 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 HTRA2O43464 458 aaPredicted RBP15.22■□□□□ 0.03
DDX56-201ENST00000258772 H6PDO95479 791 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 TBX18O95935 607 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 ZNF37AP17032 561 aaPredicted RBP15.22■□□□□ 0.03
DDX56-201ENST00000258772 HOXB8P17481 243 aaPredicted RBP15.22■□□□□ 0.03
DDX56-201ENST00000258772 ATP6V1B2P21281 511 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 PBX3P40426 434 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 SUOXP51687 545 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 ILF2Q12905 390 aaKnown RBP15.22■□□□□ 0.03
DDX56-201ENST00000258772 GRB7Q14451 532 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 TAF1CQ15572 869 aaPredicted RBP15.22■□□□□ 0.03
DDX56-201ENST00000258772 GEN1Q17RS7 908 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 VPS26BQ4G0F5 336 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 MRNIPQ6NTE8 343 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 PPP4R4Q6NUP7 873 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 ARHGAP22Q7Z5H3 698 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 RAB44Q7Z6P3 723 aaPredicted RBP15.22■□□□□ 0.03
DDX56-201ENST00000258772 PHYKPLQ8IUZ5 450 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 MIER2Q8N344 545 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 RHEBL1Q8TAI7 183 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 PEX13Q92968 403 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 BTN2A3PQ96KV6 586 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 HAUS8Q9BT25 410 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 IL1RL2Q9HB29 575 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 CCM2LQ9NUG4 571 aaPredicted RBP15.22■□□□□ 0.03
DDX56-201ENST00000258772 OLAHQ9NV23 265 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 GMIPQ9P107 970 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 ABCD2Q9UBJ2 740 aa15.22■□□□□ 0.03
DDX56-201ENST00000258772 PLXNA3P51805 1871 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 KLHL33A6NCF5 533 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 H3BMM5 538 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 AKAP10O43572 662 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 RAMP2O60895 175 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 GRK4P32298 578 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 SERINC3Q13530 473 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 LPIN1Q14693 890 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 TMEM259Q4ZIN3 620 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 RAP1GAP2Q684P5 730 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 IL31Q6EBC2 164 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 ERMP1Q7Z2K6 904 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 SLC15A3Q8IY34 581 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 ALDH16A1Q8IZ83 802 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 TRIML2Q8N7C3 387 aa15.21■□□□□ 0.03
DDX56-201ENST00000258772 FAM110BQ8TC76 370 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms