RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 MYH4Q9Y623 1939 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ABCC6O95255 1503 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 TUBGCP6Q96RT7 1819 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 DLG5Q8TDM6 1919 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 MARCH11A6NNE9 402 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 H0YIN7 160 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 TCAPO15273 167 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ENDOD1O94919 500 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 RASAL1O95294 804 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 EOMESO95936 686 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 YES1P07947 543 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 HOXA11P31270 313 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ARPP19P56211 112 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 DEFA6Q01524 100 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 CNTN2Q02246 1040 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 CLCQ05315 142 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 CDH17Q12864 832 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 TRAF2Q12933 501 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 PICALMQ13492 652 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 PTPRRQ15256 657 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 SWI5Q1ZZU3 235 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 PAN3Q58A45 887 aaKnown RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 RALGPS1Q5JS13 557 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 KRT39Q6A163 491 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 LMBR1LQ6UX01 489 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 EFL1Q7Z2Z2 1120 aaKnown RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 LYSMD3Q7Z3D4 306 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ADAMTS19Q8TE59 1207 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 PDCD6IPQ8WUM4 868 aaKnown RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 PROX1Q92786 737 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 DCPSQ96C86 337 aaKnown RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 KCNC2Q96PR1 638 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 PANX3Q96QZ0 392 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 DPYSL5Q9BPU6 564 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 METTL22Q9BUU2 404 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ZC3H12CQ9C0D7 883 aaKnown RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 FBXO28Q9NVF7 368 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ABCD2Q9UBJ2 740 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 AMFRQ9UKV5 643 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 GPR34Q9UPC5 381 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 CRYL1Q9Y2S2 319 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 AP4B1Q9Y6B7 739 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 NWD1Q149M9 1564 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 TOPAZ1Q8N9V7 1692 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 OR6C70A6NIJ9 312 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF879B4DU55 563 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 NPC1O15118 1278 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 RAD51CO43502 376 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 FBP1P09467 338 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 MYBP10242 640 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 IMPDH1P20839 514 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 GABRB3P28472 473 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PREPP48147 710 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 BCAR1P56945 870 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PPATQ06203 517 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 NFYCQ13952 458 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 GK3PQ14409 553 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 ETFDHQ16134 617 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 OCLNQ16625 522 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF568Q3ZCX4 644 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 ARMCX4Q5H9R4 360 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 HORMAD1Q86X24 394 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 ZDHHC13Q8IUH4 622 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 LACC1Q8IV20 430 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 NAXEQ8NCW5 288 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 TRPV1Q8NER1 839 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 JADE3Q92613 823 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CPNE4Q96A23 557 aaPredicted RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 NTAN1Q96AB6 310 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 FCRL4Q96PJ5 515 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CHP1Q99653 195 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 GDF15Q99988 308 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 LACRTQ9GZZ8 138 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 ARL8BQ9NVJ2 186 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 VPS54Q9P1Q0 977 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 MIOXQ9UGB7 285 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 TNFSF13BQ9Y275 285 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 NAALAD2Q9Y3Q0 740 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CNTNAP2Q9UHC6 1331 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 MEX3AA1L020 520 aaKnown RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 LINC00862A6NCI5 91 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 TOX3O15405 576 aaPredicted RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 GPAA1O43292 621 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PCDHGA12O60330 932 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 EFCAB14O75071 495 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 MED6O75586 246 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 GCATO75600 419 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PCDH8O95206 1070 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 NUDT17P0C025 328 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CD1EP15812 388 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CD36P16671 472 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF182P17025 639 aaPredicted RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 TYRP1P17643 537 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 GRIA1P42261 906 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 NDST2P52849 883 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 HUNKP57058 714 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 MADCAM1Q13477 382 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 MRPL58Q14197 206 aaKnown RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 USP10Q14694 798 aaKnown RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 SEC23BQ15437 767 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms