RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 LIN54Q6MZP7 749 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 PAGE2Q7Z2X7 111 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 XAGE5Q8WWM1 108 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 CCDC115Q96NT0 180 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 AGO1Q9UL18 857 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 CDH7Q9ULB5 785 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 OTOL1A6NHN0 477 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 HCN1O60741 890 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 PROSCO94903 275 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 MED26O95402 600 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 SEPHS1P49903 392 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 BEND4Q6ZU67 534 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 NECTIN3Q9NQS3 549 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 CFAP20Q9Y6A4 193 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 PGM3O95394 542 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 ACADLP28330 430 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 LENG9Q96B70 501 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 PPCDCQ96CD2 204 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 RTFDC1Q9BY42 306 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 CCDC177Q9NQR7 707 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 SLC6A9P48067 706 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 ARFIP1P53367 373 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 CCZ1BP86790 482 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 CCZ1P86791 482 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 CELF3Q5SZQ8 465 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 GALNT13Q8IUC8 556 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 SLC47A1Q96FL8 570 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 C1QTNF1Q9BXJ1 281 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 C17orf75Q9HAS0 396 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 HMG20AQ9NP66 347 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 ETNK2Q9NVF9 386 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 GMIPQ9P107 970 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 GLI2P10070 1586 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 SCGB1D2O95969 90 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 ZBTB6Q15916 424 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 MSANTD2Q6P1R3 559 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 CASZ1Q86V15 1759 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 ARMC10Q8N2F6 343 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 ALG2Q9H553 416 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 PLGRKTQ9HBL7 147 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 ZSCAN5CA6NGD5 496 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 FOXP2O15409 715 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 TLR5O60602 858 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 SPANXN2Q5MJ10 180 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 OVCA2Q8WZ82 227 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 TBC1D10AQ9BXI6 508 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 C15orf38-AP3S2A0A0A6YYH1 394 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 TMEM88BA6NKF7 163 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 J3QRK9 145 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 CORO1AP31146 461 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 PBX3P40426 434 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 DNASE1L3Q13609 305 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 SPESP1Q6UW49 350 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 USP50Q70EL3 339 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 DNAAF1Q8NEP3 725 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 FCF1Q9Y324 198 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 PRDM15P57071 1507 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 FAM205AQ6ZU69 1335 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 RPTORQ8N122 1335 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 CCDC163A0A0D9SF12 145 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 IFNA6P05013 189 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 NR1D2Q14995 579 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 PIH1D2Q8WWB5 315 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 WHRNQ9P202 907 aa17.85■□□□□ 0.45
CACNA1A-227ENST00000636549 TRUB2O95900 331 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 CST1P01037 141 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 FAM58BPP0C7Q3 252 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 CBLP22681 906 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 CDC42P60953 191 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 SCN1BQ07699 218 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 RHBDF2Q6PJF5 856 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 CBX6O95503 412 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 CALB2P22676 271 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 UNC5AQ6ZN44 842 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 ZBTB8BQ8NAP8 495 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 SCLYQ96I15 445 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 ALKQ9UM73 1620 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 CTDNEP1O95476 244 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 ALOX5P09917 674 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 GRSF1Q12849 480 aaKnown RBP eCLIP17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 NEK5Q6P3R8 708 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 HFE2Q6ZVN8 426 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 PTCD2Q8WV60 388 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 TRIM2Q9C040 744 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 COPS7AQ9UBW8 275 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 DHRS7Q9Y394 339 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 UMODL1Q5DID0 1318 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 KLRG2A4D1S0 409 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 CCL22O00626 93 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 ODF4Q2M2E3 257 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 PSMA8Q8TAA3 256 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 HIST1H2AAQ96QV6 131 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 CYP3A43Q9HB55 503 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 MAGI3Q5TCQ9 1506 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 BHMG1C9JSJ3 638 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 UBOX5O94941 541 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 NPR3P17342 541 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 CHKAP35790 457 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 Q4G0T1 1027 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms