RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 PPP6CO00743 305 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 SCAMP3O14828 347 aaKnown RBP22.7■■□□□ 1.22
SRRM1-222ENST00000596378 TSPAN3O60637 253 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 SIX3O95343 332 aaPredicted RBP22.7■■□□□ 1.22
SRRM1-222ENST00000596378 NDST3O95803 873 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 MYCP01106 439 aaPredicted RBP22.7■■□□□ 1.22
SRRM1-222ENST00000596378 ADSLP30566 484 aaPredicted RBP22.7■■□□□ 1.22
SRRM1-222ENST00000596378 OR4D1Q15615 310 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 C5orf22Q49AR2 442 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 SLC22A9Q8IVM8 553 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 FAM126BQ8IXS8 530 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 PGAM4Q8N0Y7 254 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 CRIPAKQ8N1N5 446 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 SEPT8Q92599 483 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 WBP2Q969T9 261 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 RMDN1Q96DB5 314 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 MAGEH1Q9H213 219 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 EBF3Q9H4W6 596 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 UBA2Q9UBT2 640 aaPredicted RBP22.7■■□□□ 1.22
SRRM1-222ENST00000596378 UBA6A0AVT1 1052 aaPredicted RBP22.7■■□□□ 1.22
SRRM1-222ENST00000596378 MS4A2Q01362 244 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 ELAVL2Q12926 359 aaKnown RBP22.7■■□□□ 1.22
SRRM1-222ENST00000596378 TRIP10Q15642 601 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 UNC50Q53HI1 259 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 CYHR1Q6ZMK1 362 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 FAM156AQ8NDB6 213 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 CDKN2AIPNLQ96HQ2 116 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 ZNF599Q96NL3 588 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 SERPINI1Q99574 410 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 ZBED2Q9BTP6 218 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 EFCAB1Q9HAE3 211 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 TRPC7Q9HCX4 862 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 COMMD8Q9NX08 183 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 TRAF6Q9Y4K3 522 aa22.7■■□□□ 1.22
SRRM1-222ENST00000596378 ZNF840PA6NDX5 716 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 UBXN8O00124 270 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 EPOP01588 193 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 PMLP29590 882 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 SLC11A2P49281 568 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 STC1P52823 247 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 OXCT1P55809 520 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 SATB1Q01826 763 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 BFSP2Q13515 415 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 PTPRRQ15256 657 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 ALG1LQ6GMV1 187 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 C16orf59Q7L2K0 433 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 GPR150Q8NGU9 434 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 CYP2S1Q96SQ9 504 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 SEPT3Q9UH03 358 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 PHF24Q9UPV7 400 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 A0A0U1RQS6 177 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 SEC24AO95486 1093 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 ZNF37AP17032 561 aaPredicted RBP22.69■■□□□ 1.22
SRRM1-222ENST00000596378 TCN1P20061 433 aaPredicted RBP22.69■■□□□ 1.22
SRRM1-222ENST00000596378 CDH4P55283 916 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 SMARCB1Q12824 385 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 FLOT2Q14254 428 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 ACBD5Q5T8D3 534 aaPredicted RBP22.69■■□□□ 1.22
SRRM1-222ENST00000596378 CHSY3Q70JA7 882 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 PDSS2Q86YH6 399 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 PTGR2Q8N8N7 351 aaPredicted RBP22.69■■□□□ 1.22
SRRM1-222ENST00000596378 MDGA1Q8NFP4 955 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 OR4K2Q8NGD2 314 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 PXYLP1Q8TE99 480 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 GATA6Q92908 595 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 PSKH2Q96QS6 385 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 DDX50Q9BQ39 737 aaKnown RBP22.69■■□□□ 1.22
SRRM1-222ENST00000596378 VN1R3Q9BXE9 311 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 PPP1R12CQ9BZL4 782 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 CCDC167Q9P0B6 97 aa22.69■■□□□ 1.22
SRRM1-222ENST00000596378 MKI67P46013 3256 aaKnown RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 CBX4O00257 560 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 UBDO15205 165 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 SNUPNO95149 360 aaKnown RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 CORO1AP31146 461 aaKnown RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 CDKN1CP49918 316 aaPredicted RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 AQP4P55087 323 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 MRPS22P82650 360 aaKnown RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 PCDH20Q8N6Y1 951 aaKnown RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 C2orf15Q8WU43 125 aaKnown RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 L3HYPDHQ96EM0 354 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 FAR2Q96K12 515 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 FBRSL1Q9HCM7 1045 aaKnown RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 CREBZFQ9NS37 354 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 FAM50BQ9Y247 325 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 FNDC3AQ9Y2H6 1198 aaKnown RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 PTGDR2Q9Y5Y4 395 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 FMO4P31512 558 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 SLC26A3P40879 764 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 ZNF140P52738 457 aaPredicted RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 PDAP1Q13442 181 aaKnown RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 FBXO48Q5FWF7 155 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 BBS5Q8N3I7 341 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 AFAP1L2Q8N4X5 818 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 CAPNS2Q96L46 248 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 C3orf30Q96M34 536 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 NSUN5Q96P11 429 aaKnown RBP22.68■■□□□ 1.22
SRRM1-222ENST00000596378 PCDHGC4Q9Y5F7 938 aa22.68■■□□□ 1.22
SRRM1-222ENST00000596378 INSIG1O15503 277 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 MAP3K13O43283 966 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms