RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDK5RAP3-229ENST00000583697 AKAP7Q9P0M2 348 aaPredicted RBP8.73□□□□□ -1.01
CDK5RAP3-229ENST00000583697 B4GALT6Q9UBX8 382 aa8.73□□□□□ -1.01
CDK5RAP3-229ENST00000583697 PISDQ9UG56 409 aa8.73□□□□□ -1.01
CDK5RAP3-229ENST00000583697 LUC7L2Q9Y383 392 aaKnown RBP8.73□□□□□ -1.01
CDK5RAP3-229ENST00000583697 LOXL2Q9Y4K0 774 aa8.73□□□□□ -1.01
CDK5RAP3-229ENST00000583697 ZFYVE26Q68DK2 2539 aa8.73□□□□□ -1.01
CDK5RAP3-229ENST00000583697 BPTFQ12830 3046 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 BAHCC1Q9P281 2608 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 A0A1W2PQM1 296 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 PSMD11O00231 422 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 TRAFD1O14545 582 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 TNFRSF10CO14798 259 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 FTLP02792 175 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 LIPCP11150 499 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 GZMAP12544 262 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 PLA2G2AP14555 144 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 PNLIPP16233 465 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 VIPR1P32241 457 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 UGT1A5P35504 534 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 PCK1P35558 622 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 CDH6P55285 790 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 CLN3Q13286 438 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 PEX6Q13608 980 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 DPYSQ14117 519 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 CNGA3Q16281 694 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 CERCAMQ5T4B2 595 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 PHF19Q5T6S3 580 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 KIAA1614Q5VZ46 1190 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 RAET1GQ6H3X3 334 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 PNCKQ6P2M8 343 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 NYAP1Q6ZVC0 841 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 CYP4V2Q6ZWL3 525 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 ZNF571Q7Z3V5 609 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 SPRED1Q7Z699 444 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 VSTM4Q8IW00 320 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 NDUFAF2Q8N183 169 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 ARFGAP1Q8N6T3 406 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 Q8N9G6 341 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 SNRNP27Q8WVK2 155 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 TMEM159Q96B96 161 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 WBP1Q96G27 269 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 NUDCD1Q96RS6 583 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 CCNL2Q96S94 520 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 MGME1Q9BQP7 344 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 GSDMCQ9BYG8 508 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 TMEM168Q9H0V1 697 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 CDH19Q9H159 772 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 HAUS2Q9NVX0 235 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 CWC15Q9P013 229 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 SEPT10Q9P0V9 454 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 LRIT1Q9P2V4 623 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 ANAPC7Q9UJX3 599 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 APPL1Q9UKG1 709 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 ATXN7L1Q9ULK2 861 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 PCDHGC4Q9Y5F7 938 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 PCDHGA7Q9Y5G6 932 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 RNF215Q9Y6U7 377 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 SCN8AQ9UQD0 1980 aa8.72□□□□□ -1.01
CDK5RAP3-229ENST00000583697 RHPN2P1A8MT19 583 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 AGRPO00253 132 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 DDX3XO00571 662 aaKnown RBP eCLIP8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 NUDT21O43809 227 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 NOBOXO60393 691 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 HEXIM1O94992 359 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 HOXC4P09017 264 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 KRT10P13645 584 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 HGFP14210 728 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 CCNB1P14635 433 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 ITIH1P19827 911 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 SLC5A2P31639 672 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 PBX1P40424 430 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 SSR1P43307 286 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 MMP13P45452 471 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 GNPDA1P46926 289 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 HCAR3P49019 387 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 PPM1FP49593 454 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 MAXP61244 160 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 CDK3Q00526 305 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 TRAF2Q12933 501 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 TRIM14Q14142 442 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 LY6DQ14210 128 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 PIGHQ14442 188 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 HLTFQ14527 1009 aaKnown RBP eCLIP8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 KRT81Q14533 505 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 FIGNQ5HY92 759 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 RALGPS1Q5JS13 557 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 ARMC12Q5T9G4 340 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 TMEM164Q5U3C3 297 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 MARC1Q5VT66 337 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 E4F1Q66K89 784 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 KCTD16Q68DU8 428 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 PCSK4Q6UW60 755 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 ZDHHC1Q8WTX9 485 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 SPOCK2Q92563 424 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 TTC9Q92623 222 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 DTD2Q96FN9 168 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 CSPG4P5Q96PW8 444 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 LGR4Q9BXB1 951 aa8.71□□□□□ -1.02
CDK5RAP3-229ENST00000583697 POLR1EQ9GZS1 481 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms