RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 APPL1Q9UKG1 709 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 CAPN11Q9UMQ6 739 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 PCDHGA7Q9Y5G6 932 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 COL6A6A6NMZ7 2263 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 A0A1W2PQM1 296 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 PMS2P1A4D2B8 440 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 A8MX80 341 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 B4DGG1 531 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 K7ENP7 123 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 TRAFD1O14545 582 aaPredicted RBP13.15□□□□□ -0.3
SPG7-221ENST00000569720 ZW10O43264 779 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 CYP2A6P11509 494 aaPredicted RBP13.15□□□□□ -0.3
SPG7-221ENST00000569720 SLC5A2P31639 672 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 CCKBRP32239 447 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 PCK1P35558 622 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 PRKCIP41743 596 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 GSDMDP57764 484 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 ZBED6P86452 979 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 SLC10A7Q0GE19 358 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 CLN3Q13286 438 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 DPYSQ14117 519 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 C14orf28Q4W4Y0 310 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 BOLA3Q53S33 107 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 CERCAMQ5T4B2 595 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 INO80CQ6PI98 192 aaPredicted RBP13.15□□□□□ -0.3
SPG7-221ENST00000569720 OGFOD3Q6PK18 319 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 TMCO3Q6UWJ1 677 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 NYAP1Q6ZVC0 841 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 B3GNT8Q7Z7M8 397 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 CNGA4Q8IV77 575 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 PDCD6IPQ8WUM4 868 aaKnown RBP13.15□□□□□ -0.3
SPG7-221ENST00000569720 TMEM159Q96B96 161 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 NUS1Q96E22 293 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 CCNL2Q96S94 520 aaPredicted RBP13.15□□□□□ -0.3
SPG7-221ENST00000569720 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
SPG7-221ENST00000569720 FOXP3Q9BZS1 431 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 TMEM168Q9H0V1 697 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 MRPL40Q9NQ50 206 aaKnown RBP13.15□□□□□ -0.3
SPG7-221ENST00000569720 PHPT1Q9NRX4 125 aaPredicted RBP13.15□□□□□ -0.3
SPG7-221ENST00000569720 LRIT1Q9P2V4 623 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 MYO1AQ9UBC5 1043 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 B4GALT6Q9UBX8 382 aa13.15□□□□□ -0.3
SPG7-221ENST00000569720 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
SPG7-221ENST00000569720 BZW2Q9Y6E2 419 aaKnown RBP13.15□□□□□ -0.3
SPG7-221ENST00000569720 PRSS38A1L453 326 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 DDX3XO00571 662 aaKnown RBP eCLIP13.14□□□□□ -0.31
SPG7-221ENST00000569720 NOBOXO60393 691 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 CPP00450 1065 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 MYCLP1P12525 358 aaPredicted RBP13.14□□□□□ -0.31
SPG7-221ENST00000569720 PLA2G2AP14555 144 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 VIPR1P32241 457 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 SERPINB6P35237 376 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 DPYSL2Q16555 572 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 RALGPS1Q5JS13 557 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 DENND2CQ68D51 928 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 CYP4V2Q6ZWL3 525 aaPredicted RBP13.14□□□□□ -0.31
SPG7-221ENST00000569720 ATPAF2Q8N5M1 289 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 SPOCK2Q92563 424 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 HSPH1Q92598 858 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 COQ10AQ96MF6 247 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 NUDCD1Q96RS6 583 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 LGR4Q9BXB1 951 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 PHTF1Q9UMS5 762 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 LOXL2Q9Y4K0 774 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 PCDHGC4Q9Y5F7 938 aa13.14□□□□□ -0.31
SPG7-221ENST00000569720 PIEZO2Q9H5I5 2752 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 PSMD11O00231 422 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 NVLO15381 856 aaKnown RBP13.13□□□□□ -0.31
SPG7-221ENST00000569720 HTRA2O43464 458 aaPredicted RBP13.13□□□□□ -0.31
SPG7-221ENST00000569720 NUDT21O43809 227 aaKnown RBP13.13□□□□□ -0.31
SPG7-221ENST00000569720 KRT10P13645 584 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 GM2AP17900 193 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 AMPD1P23109 780 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 CDH6P55285 790 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 ILF3Q12906 894 aaKnown RBP eCLIP13.13□□□□□ -0.31
SPG7-221ENST00000569720 TBX2Q13207 712 aaPredicted RBP13.13□□□□□ -0.31
SPG7-221ENST00000569720 PEX6Q13608 980 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 PIGHQ14442 188 aaPredicted RBP13.13□□□□□ -0.31
SPG7-221ENST00000569720 HLTFQ14527 1009 aaKnown RBP eCLIP13.13□□□□□ -0.31
SPG7-221ENST00000569720 CNGA3Q16281 694 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 SMTNL2Q2TAL5 461 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 KCTD16Q68DU8 428 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 POLNQ7Z5Q5 900 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 SPRED1Q7Z699 444 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 TP53INP2Q8IXH6 220 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 NDUFAF2Q8N183 169 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 TTC9Q92623 222 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 CMKLR1Q99788 373 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 GSDMCQ9BYG8 508 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 ISCUQ9H1K1 167 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 CARS2Q9HA77 564 aaKnown RBP13.13□□□□□ -0.31
SPG7-221ENST00000569720 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.13□□□□□ -0.31
SPG7-221ENST00000569720 AKAP7Q9P0M2 348 aaPredicted RBP13.13□□□□□ -0.31
SPG7-221ENST00000569720 SEPT10Q9P0V9 454 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 PISDQ9UG56 409 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 ATXN7L1Q9ULK2 861 aaPredicted RBP13.13□□□□□ -0.31
SPG7-221ENST00000569720 RNF215Q9Y6U7 377 aa13.13□□□□□ -0.31
SPG7-221ENST00000569720 AHCTF1Q8WYP5 2266 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms