RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 SP110Q9HB58 689 aa22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 LIMA1Q9UHB6 759 aaKnown RBP22.95■■□□□ 1.26
CNEP1R1-209ENST00000567712 TMCO5BA8MYB1 307 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 CEACAM5P06731 702 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 PSMA2P25787 234 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 UBXN1Q04323 297 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 NSUN2Q08J23 767 aaKnown RBP eCLIP22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 CNGA3Q16281 694 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 TBR1Q16650 682 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 ERMARDQ5T6L9 678 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 IRF2BP2Q7Z5L9 587 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 PGBD5Q8N414 524 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 ERGIC2Q96RQ1 377 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 CMKLR1Q99788 373 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 CARS2Q9HA77 564 aaKnown RBP22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 PCDHGC4Q9Y5F7 938 aa22.94■■□□□ 1.26
CNEP1R1-209ENST00000567712 A0A0U1RQS6 177 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 TERTO14746 1132 aaKnown RBP22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 ITGB2P05107 769 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 CCNB1P14635 433 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 KELP23276 732 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 IL10RBQ08334 325 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 MAP9Q49MG5 647 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 PLEKHA7Q6IQ23 1121 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 ZNF438Q7Z4V0 828 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 CBARPQ8N350 705 aaPredicted RBP22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 TMEM159Q96B96 161 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 FAM117AQ9C073 453 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 LMBRD1Q9NUN5 540 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 CWC15Q9P013 229 aaKnown RBP22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 PTPN13Q12923 2485 aa22.93■■□□□ 1.26
CNEP1R1-209ENST00000567712 ECEL1O95672 775 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 PEX11BO96011 259 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 TPM2P07951 284 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 MYCLP1P12525 358 aaPredicted RBP22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 CR2P20023 1033 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 ALDH4A1P30038 563 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 MIPP30301 263 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 POLD2P49005 469 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 CLCA4Q14CN2 919 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 PPP6R3Q5H9R7 873 aaPredicted RBP22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 DENND2CQ68D51 928 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 HSD11B1LQ7Z5J1 315 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 HEATR4Q86WZ0 1026 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 ZDHHC1Q8WTX9 485 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 NUS1Q96E22 293 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 PSKH2Q96QS6 385 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 ARHGAP9Q9BRR9 750 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 TEX101Q9BY14 249 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 FRMD8Q9BZ67 464 aaPredicted RBP22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 TAAR2Q9P1P5 351 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 IL17BQ9UHF5 180 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 PLEKHM1Q9Y4G2 1056 aa22.92■■□□□ 1.26
CNEP1R1-209ENST00000567712 UBR5O95071 2799 aaPredicted RBP22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 IGHV5-10-1A0A0J9YXX1 117 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 A0A1W2PQC6 194 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 ARHGAP6O43182 974 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 HTRA2O43464 458 aaPredicted RBP22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 CPNE6O95741 557 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 FGF3P11487 239 aaPredicted RBP22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 LHCGRP22888 699 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 CD1CP29017 333 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 ETV3P41162 512 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 POLR2LP62875 67 aaKnown RBP22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 DPYSQ14117 519 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 LBRQ14739 615 aaKnown RBP22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 NR1D2Q14995 579 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 NKAIN2Q5VXU1 208 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 RBM43Q6ZSC3 357 aaKnown RBP22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 RFLNAQ6ZTI6 216 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 PIM3Q86V86 326 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 NAGSQ8N159 534 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 PAF1Q8N7H5 531 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 FUCA2Q9BTY2 467 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 ETNK2Q9NVF9 386 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 DONSONQ9NYP3 566 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 SEPT10Q9P0V9 454 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 SUFUQ9UMX1 484 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 HEMK1Q9Y5R4 338 aaPredicted RBP22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 DOPEY2Q9Y3R5 2298 aa22.91■■□□□ 1.26
CNEP1R1-209ENST00000567712 TMEM191CA6NGB0 347 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 LRRC10BA6NIK2 292 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 PPM1DO15297 605 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 DAPK3O43293 454 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 HEXIM1O94992 359 aaKnown RBP22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 TNFAIP3P21580 790 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 GNPDA1P46926 289 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 CSRP3P50461 194 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 AP1S1P61966 158 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 CDK3Q00526 305 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 TRAF2Q12933 501 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 RFTN1Q14699 578 aaPredicted RBP22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 NCAPHQ15003 741 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 SLC30A9Q6PML9 568 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 TSPAN33Q86UF1 283 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 SPOCK2Q92563 424 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 CCDC74BQ96LY2 380 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 SMIM14Q96QK8 99 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 SEPT3Q9UH03 358 aa22.9■■□□□ 1.26
CNEP1R1-209ENST00000567712 SUV39H1O43463 412 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms