RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PDCD7Q8N8D1 485 aaKnown RBP10.72□□□□□ -0.69
TPM1-229ENST00000561242 PPHLN1Q8NEY8 458 aaKnown RBP10.72□□□□□ -0.69
TPM1-229ENST00000561242 COG1Q8WTW3 980 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 PIH1D2Q8WWB5 315 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 DCUN1D1Q96GG9 259 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 WDR24Q96S15 920 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 C1QTNF2Q9BXJ5 285 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 ZCCHC2Q9C0B9 1178 aaKnown RBP10.72□□□□□ -0.69
TPM1-229ENST00000561242 GAREM1Q9H706 876 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 WDR26Q9H7D7 661 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 USP29Q9HBJ7 922 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 ETNK1Q9HBU6 452 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 APPL1Q9UKG1 709 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 SHOC2Q9UQ13 582 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 COL6A3P12111 3177 aa10.72□□□□□ -0.69
TPM1-229ENST00000561242 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.71□□□□□ -0.69
TPM1-229ENST00000561242 CFAP99D6REC4 459 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 SMAPO00193 183 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 ZNF185O15231 689 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 LATO43561 262 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 AP2A1O95782 977 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 IGHV4-34P06331 123 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 PDHA1P08559 390 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 ENGP17813 658 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 NPY2RP49146 381 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 CCT8P50990 548 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 TAS2R38P59533 333 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 HNRNPKP61978 463 aaKnown RBP eCLIP10.71□□□□□ -0.69
TPM1-229ENST00000561242 IRX4P78413 519 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 COL4A3Q01955 1670 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 SEMG2Q02383 582 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 PPARDQ03181 441 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 ITGA9Q13797 1035 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 PDE1CQ14123 709 aaPredicted RBP10.71□□□□□ -0.69
TPM1-229ENST00000561242 DHX34Q14147 1143 aaKnown RBP10.71□□□□□ -0.69
TPM1-229ENST00000561242 INPP5AQ14642 412 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 TAF1AQ15573 450 aaPredicted RBP10.71□□□□□ -0.69
TPM1-229ENST00000561242 TRIP13Q15645 432 aaPredicted RBP10.71□□□□□ -0.69
TPM1-229ENST00000561242 WHAMMP3Q1A5X7 153 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 DNAJC21Q5F1R6 531 aaKnown RBP10.71□□□□□ -0.69
TPM1-229ENST00000561242 MIA3Q5JRA6 1907 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 CRTC1Q6UUV9 634 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 ENPP7Q6UWV6 458 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 ASCL5Q7RTU5 278 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 RD3Q7Z3Z2 195 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 C17orf53Q8N3J3 647 aaPredicted RBP10.71□□□□□ -0.69
TPM1-229ENST00000561242 CEP112Q8N8E3 955 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 BRSK1Q8TDC3 778 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 NETO1Q8TDF5 533 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 SETD7Q8WTS6 366 aaKnown RBP10.71□□□□□ -0.69
TPM1-229ENST00000561242 APOL2Q9BQE5 337 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 RAB17Q9H0T7 212 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 FZD3Q9NPG1 666 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 DNAJC28Q9NX36 388 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 COQ6Q9Y2Z9 468 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 PPIL1Q9Y3C6 166 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 ZNF711Q9Y462 761 aa10.71□□□□□ -0.69
TPM1-229ENST00000561242 KIF26AQ9ULI4 1882 aaPredicted RBP10.7□□□□□ -0.7
TPM1-229ENST00000561242 LOC285095A0A1B0GVY8 99 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 MAGEB16A2A368 324 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 HEATR9A2RTY3 570 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 CTAGE15A4D2H0 777 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 NPIPB15A6NHN6 443 aaPredicted RBP10.7□□□□□ -0.7
TPM1-229ENST00000561242 GJB3O75712 270 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 SLC25A14O95258 325 aaPredicted RBP10.7□□□□□ -0.7
TPM1-229ENST00000561242 RASGRP1O95267 797 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 PIRTP0C851 137 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 CTAGE8P0CG41 777 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 C7P10643 843 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 VCLP18206 1134 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 ITIH2P19823 946 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 CD68P34810 354 aaPredicted RBP10.7□□□□□ -0.7
TPM1-229ENST00000561242 RPL22P35268 128 aaKnown RBP10.7□□□□□ -0.7
TPM1-229ENST00000561242 SPAM1P38567 509 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 ETV3P41162 512 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 CLDN2P57739 230 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 PRAMEP78395 509 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 SPARCL1Q14515 664 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 SF3A2Q15428 464 aaKnown RBP10.7□□□□□ -0.7
TPM1-229ENST00000561242 OASLQ15646 514 aaKnown RBP10.7□□□□□ -0.7
TPM1-229ENST00000561242 CNGA3Q16281 694 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 SIRPB2Q5JXA9 342 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 ALS2CLQ60I27 953 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 PNCKQ6P2M8 343 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 KYAT3Q6YP21 454 aaKnown RBP10.7□□□□□ -0.7
TPM1-229ENST00000561242 Q6ZVL8 140 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 TAS2R42Q7RTR8 314 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 CTAGE6Q86UF2 777 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 CTAGE4Q8IX94 777 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 DCLK2Q8N568 766 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 PRELID2Q8N945 189 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 HEXDCQ8WVB3 486 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 SPOCK2Q92563 424 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 ULK4Q96C45 1275 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 MRGPRX2Q96LB1 330 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 ZSCAN5AQ9BUG6 496 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 APOOQ9BUR5 198 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 FRMD8Q9BZ67 464 aaPredicted RBP10.7□□□□□ -0.7
TPM1-229ENST00000561242 SPASTQ9UBP0 616 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 KLQ9UEF7 1012 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms