RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 FANCFQ9NPI8 374 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 C3orf18Q9UK00 162 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 SHOC2Q9UQ13 582 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RHPN2P1A8MT19 583 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 C9JVG2 144 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 EIF3FO00303 357 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 LRATO95237 230 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 HERVK_113P63132 956 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 HSD17B14Q9BPX1 270 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CACNG6Q9BXT2 260 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PTBP2Q9UKA9 531 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TIMM22Q9Y584 194 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 LOC100130705A0A1B0GUX0 176 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 DYNC1LI2O43237 492 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CACNB3P54284 484 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PIWIL3Q7Z3Z3 882 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 WDR49Q8IV35 697 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 UNC5BQ8IZJ1 945 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SPATA20Q8TB22 786 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TRIM43Q96BQ3 446 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SLC7A6OSQ96CW6 309 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 BIN3Q9NQY0 253 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 UBQLN1Q9UMX0 589 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PDE4DIPQ5VU43 2346 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RPA4Q13156 261 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ARHGEF7Q14155 803 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ANKRD26P1Q6NSI1 321 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 R3HCC1LQ7Z5L2 792 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 LGMNQ99538 433 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 MECRQ9BV79 373 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ERVK-6Q9BXR3 956 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 FAM83DQ9H4H8 585 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TMLHEQ9NVH6 421 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ANKRD34BA5PLL1 514 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 OR6C74A6NCV1 312 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 H0Y858 1186 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SLC28A1O00337 649 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 NUAK1O60285 661 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PHKG2P15735 406 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 YWHAZP63104 245 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PLA2G4EQ3MJ16 856 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 C1orf186Q6ZWK4 172 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 COLGALT2Q8IYK4 626 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ZFP42Q96MM3 310 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PHOX2BQ99453 314 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RIT2Q99578 217 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ADGRE3Q9BY15 652 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 STARD7Q9NQZ5 370 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.69□□□□□ -1.824e-6■■□□□ 12.1
ATXN3-248ENST00000558190 EML1O00423 815 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CTDSP2O14595 271 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 FCER2P06734 321 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CDH1P12830 882 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ALAS2P22557 587 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SOX10P56693 466 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PSMA6P60900 246 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF235Q14590 738 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 OTOP1Q7RTM1 612 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 KRT78Q8N1N4 520 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SLC43A3Q8NBI5 491 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 XAGE5Q8WWM1 108 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PABPC5Q96DU9 382 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SCRN2Q96FV2 425 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 DUSP16Q9BY84 665 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SP110Q9HB58 689 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CXorf49A8MYA2 514 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RPS3P23396 243 aaKnown RBP eCLIP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CCNA1P78396 465 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CHST4Q8NCG5 386 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RGS12O14924 1447 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ISPDA4D126 451 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CHADO15335 359 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 VNN2O95498 520 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 GRM1Q13255 1194 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 HAVCR1Q96D42 359 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TPT1P8Q9HAU6 139 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RC3H2Q9HBD1 1191 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 KLHL18O94889 574 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ETV3P41162 512 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PRKAG1P54619 331 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RNF219Q5W0B1 726 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ASB15Q8WXK1 588 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 C5orf51A6NDU8 294 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TPP1O14773 563 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CASKO14936 926 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RNASEH2AO75792 299 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PAEPP09466 180 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SF3B4Q15427 424 aaKnown RBP eCLIP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 LSM12Q3MHD2 195 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 NOXA1Q86UR1 476 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SLITRK4Q8IW52 837 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PJA1Q8NG27 643 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 GSKIPQ9P0R6 139 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 EBF1Q9UH73 591 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 FBXO5Q9UKT4 447 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PDPK1O15530 556 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TLX2O43763 284 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PROS1P07225 676 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SLC6A3Q01959 620 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 POU6F1Q14863 301 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms