RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 EPN2O95208 641 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 OR2C1O95371 312 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 IFNA2P01563 188 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 KRT10P13645 584 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 ETFAP13804 333 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 ENO3P13929 434 aaPredicted RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 PORP16435 677 aaPredicted RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 CDH2P19022 906 aaPredicted RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 CD38P28907 300 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 SHMT1P34896 483 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 SSBP2P81877 361 aaPredicted RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 ACVR2BQ13705 512 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 RBMS2Q15434 407 aaKnown RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 TRIP6Q15654 476 aaKnown RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 SOWAHAQ2M3V2 549 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 TCTN1Q2MV58 587 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 DUSP28Q4G0W2 176 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 CXorf66Q5JRM2 361 aaPredicted RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 GKAP1Q5VSY0 366 aaPredicted RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 MORN5Q5VZ52 161 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 SLC16A12Q6ZSM3 486 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 CAMK1DQ8IU85 385 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 SRRM1Q8IYB3 904 aaKnown RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 CCDC105Q8IYK2 499 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 ZCCHC9Q8N567 271 aaKnown RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 SRBD1Q8N5C6 995 aaKnown RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 CCDC89Q8N998 374 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 INPP5DQ92835 1189 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 SNAPC3Q92966 411 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 C1orf74Q96LT6 269 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 CMTM3Q96MX0 182 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 MSTO1Q9BUK6 570 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 TASP1Q9H6P5 420 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 MAGEE1Q9HCI5 957 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 BPIFA1Q9NP55 256 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 SMYD2Q9NRG4 433 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 ANKRD10Q9NXR5 420 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 CNOT8Q9UFF9 292 aaKnown RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 AAR2Q9Y312 384 aaKnown RBP4.79□□□□□ -1.64
PRPF39-212ENST00000557477 RGS12O14924 1447 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 RIMS2Q9UQ26 1411 aa4.79□□□□□ -1.64
PRPF39-212ENST00000557477 ANKRD30AQ9BXX3 1397 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 CROCC2H7BZ55 1655 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 SHPRHQ149N8 1683 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 GCC2Q8IWJ2 1684 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 A0A0U1RQG5 324 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-212ENST00000557477 A0A1W2PRG0 241 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 FAM90A8PA6NJQ4 464 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 MYO1GB0I1T2 1018 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 BTBD18B2RXH4 712 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 FIBPO43427 364 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 RGS11O94810 467 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 NKX2-2O95096 273 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 IPO7O95373 1038 aaKnown RBP4.78□□□□□ -1.64
PRPF39-212ENST00000557477 FGF2P09038 288 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 HOXB5P09067 269 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 FAM90A13PP0C7W8 464 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 FAM90A24PP0C7X0 464 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 PRF1P14222 555 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 AGAP20933 346 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 UBA7P41226 1012 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 SELENOVP59797 346 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 SRSF1Q07955 248 aaKnown RBP eCLIP4.78□□□□□ -1.64
PRPF39-212ENST00000557477 NIPAL4Q0D2K0 466 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 OLIG2Q13516 323 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 KLF9Q13886 244 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-212ENST00000557477 IDI1Q13907 227 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 ARHGEF6Q15052 776 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 DUSP6Q16828 381 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 RILPL1Q5EBL4 403 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 SGO1Q5FBB7 561 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 NCAPH2Q6IBW4 605 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 TRILQ7L0X0 811 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 ENOSF1Q7L5Y1 443 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 NANOGP1Q8N7R0 232 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 ZNF548Q8NEK5 533 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-212ENST00000557477 C16orf52Q8NHV5 167 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 BICD2Q8TD16 824 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 PIGOQ8TEQ8 1089 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 FBXL8Q96CD0 374 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 TRMOQ9BU70 441 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 C1QTNF5Q9BXJ0 243 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 SPRTNQ9H040 489 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-212ENST00000557477 KAT14Q9H8E8 782 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 TUBA8Q9NY65 449 aaPredicted RBP4.78□□□□□ -1.64
PRPF39-212ENST00000557477 CLIC5Q9NZA1 410 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 DLGAP2Q9P1A6 1054 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 NRBP1Q9UHY1 535 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 PCDHGB4Q9UN71 923 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 BTBD3Q9Y2F9 522 aa4.78□□□□□ -1.64
PRPF39-212ENST00000557477 AHDC1Q5TGY3 1603 aaPredicted RBP4.77□□□□□ -1.65
PRPF39-212ENST00000557477 PTPN23Q9H3S7 1636 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 FAM237AA0A1B0GTK4 181 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 A8MZ25 164 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 LDB2O43679 373 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 KLKB1P03952 638 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 CSH1P0DML2 217 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 CSH2P0DML3 217 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 CBSLP0DN79 551 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 TNFRSF1BP20333 461 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms