RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 LRRC31Q6UY01 552 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 ZNF574Q6ZN55 896 aaPredicted RBP5.9□□□□□ -1.46
PRKCH-220ENST00000556164 SLC26A9Q7LBE3 791 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 KRT77Q7Z794 578 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 VASH2Q86V25 355 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 VPS36Q86VN1 386 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 KIF18BQ86Y91 864 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 NKAPQ8N5F7 415 aaKnown RBP5.9□□□□□ -1.46
PRKCH-220ENST00000556164 PCDH20Q8N6Y1 951 aaKnown RBP5.9□□□□□ -1.46
PRKCH-220ENST00000556164 ARL10Q8N8L6 244 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 KYQ8NBH2 561 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 DENND6BQ8NEG7 585 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 OR6K2Q8NGY2 324 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 OR2W6PQ8NHA6 318 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 CLIP3Q96DZ5 547 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 DHTKD1Q96HY7 919 aaPredicted RBP5.9□□□□□ -1.46
PRKCH-220ENST00000556164 CPEB1Q9BZB8 566 aaKnown RBP5.9□□□□□ -1.46
PRKCH-220ENST00000556164 TM6SF2Q9BZW4 377 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 SCAND2PQ9GZW5 306 aaPredicted RBP5.9□□□□□ -1.46
PRKCH-220ENST00000556164 CLPBQ9H078 707 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 WDCPQ9H6R7 721 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 SYNCQ9H7C4 482 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 ATP13A1Q9HD20 1204 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 ANLNQ9NQW6 1124 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 ARHGEF38Q9NXL2 777 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 SEPT10Q9P0V9 454 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 HECAQ9UBI9 543 aaPredicted RBP5.9□□□□□ -1.46
PRKCH-220ENST00000556164 STAP1Q9ULZ2 295 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 CTNND2Q9UQB3 1225 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 PCDHGA7Q9Y5G6 932 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.9□□□□□ -1.46
PRKCH-220ENST00000556164 ACTL7AQ9Y615 435 aa5.9□□□□□ -1.46
PRKCH-220ENST00000556164 BOD1L1Q8NFC6 3051 aa5.9□□□□□ -1.47
PRKCH-220ENST00000556164 FAM170AA1A519 330 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ILVBLA1L0T0 632 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 DRGXA6NNA5 263 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 BECN2A8MW95 431 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 TMX2-CTNND1H3BSU7 103 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 I6L893 689 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-220ENST00000556164 KRIT1O00522 736 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 SUV39H1O43463 412 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 NOBOXO60393 691 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 MMP20O60882 483 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 PPFIA2O75334 1257 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ZMPSTE24O75844 475 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 UGT2B4P06133 528 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ALPIP09923 528 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 PF4V1P10720 104 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 CTSEP14091 401 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ITGB6P18564 788 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ITIH1P19827 911 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 LPOP22079 712 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-220ENST00000556164 CXCR3P49682 368 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 BLKP51451 505 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 SNX16P57768 344 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 CCL7P80098 99 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ARF5P84085 180 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 SLC6A3Q01959 620 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 GNA12Q03113 381 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 PPARDQ03181 441 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 DEUP1Q05D60 604 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 SLC20A2Q08357 652 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 GRM3Q14832 879 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ELOCQ15369 112 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 TBR1Q16650 682 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 PTPN20Q4JDL3 420 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ZNF805Q5CZA5 627 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 TTI2Q6NXR4 508 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ZNF783Q6ZMS7 281 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 MACC1Q6ZN28 852 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ENOSF1Q7L5Y1 443 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 RD3Q7Z3Z2 195 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 LURAP1LQ8IV03 231 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 HID1Q8IV36 788 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 TRIM59Q8IWR1 403 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ZNF683Q8IZ20 524 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 FMR1NBQ8N0W7 255 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-220ENST00000556164 CBARPQ8N350 705 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-220ENST00000556164 FSTL5Q8N475 847 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-220ENST00000556164 WDTC1Q8N5D0 677 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 TMEM102Q8N9M5 508 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ZNF397Q8NF99 534 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-220ENST00000556164 PCDH19Q8TAB3 1148 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 CXorf40AQ8TE69 158 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 NELFBQ8WX92 580 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ASB12Q8WXK4 309 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 RAB7BQ96AH8 199 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 CENPTQ96BT3 561 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ARHGEF26Q96DR7 871 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 TBATAQ96M53 351 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 TBCBQ99426 244 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 NPY6RQ99463 290 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 CRACR2AQ9BSW2 395 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 C1QTNF7Q9BXJ2 289 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 RRN3Q9NYV6 651 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ACSL6Q9UKU0 697 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 GPR34Q9UPC5 381 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 ZDHHC9Q9Y397 364 aa5.89□□□□□ -1.47
PRKCH-220ENST00000556164 LOXL2Q9Y4K0 774 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms