RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SPATA5Q8NB90 893 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 DMBX1Q8NFW5 382 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 SLC20A1Q8WUM9 679 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 PYM1Q9BRP8 204 aaKnown RBP3.49□□□□□ -1.85
SNX6-204ENST00000555541 C17orf75Q9HAS0 396 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 DDX4Q9NQI0 724 aaKnown RBP3.49□□□□□ -1.85
SNX6-204ENST00000555541 SNTG1Q9NSN8 517 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 TAAR2Q9P1P5 351 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 PEMTQ9UBM1 199 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 TINAGQ9UJW2 476 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 POU2F3Q9UKI9 436 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 RALYQ9UKM9 306 aaKnown RBP3.49□□□□□ -1.85
SNX6-204ENST00000555541 SMAD5-AS1Q9Y6J3 95 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 KRTAP16-1A8MUX0 517 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 NBNO60934 754 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 TCEA3O75764 348 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 RNF224P0DH78 156 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 ITGADQ13349 1161 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 MMEL1Q495T6 779 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 LRRC8EQ6NSJ5 796 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 WDR73Q6P4I2 378 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 BBS12Q6ZW61 710 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.48□□□□□ -1.85
SNX6-204ENST00000555541 GPAT4Q86UL3 456 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 NOXA1Q86UR1 476 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 AGBL3Q8NEM8 1001 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 KLHDC9Q8NEP7 349 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 SLC24A4Q8NFF2 622 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 GRAPLQ8TC17 118 aaPredicted RBP3.48□□□□□ -1.85
SNX6-204ENST00000555541 RUFY2Q8WXA3 655 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 RND1Q92730 232 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 ZNF524Q96C55 264 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 ELP4Q96EB1 424 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 C17orf77Q96MU5 243 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 HAUS8Q9BT25 410 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 NUF2Q9BZD4 464 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 BARHL1Q9BZE3 327 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 PLEKHA5Q9HAU0 1116 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 PCDH9Q9HC56 1237 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 ABCF3Q9NUQ8 709 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 BABAM1Q9NWV8 329 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 IL1RAPL1Q9NZN1 696 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 KIAA1456Q9P272 454 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.48□□□□□ -1.85
SNX6-204ENST00000555541 PCDHGB3Q9Y5G1 929 aa3.48□□□□□ -1.85
SNX6-204ENST00000555541 KIAA1210Q9ULL0 1709 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 GOLGA6L10A0A0M3HER8 536 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 PMS2P5A8MQ11 134 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 CAPN9O14815 690 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 LDHAP00338 332 aaKnown RBP3.47□□□□□ -1.85
SNX6-204ENST00000555541 HEXAP06865 529 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 ETFAP13804 333 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 NR1D1P20393 614 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 AGAP20933 346 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 GPD2P43304 727 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 PITX1P78337 314 aaPredicted RBP3.47□□□□□ -1.85
SNX6-204ENST00000555541 SREBF2Q12772 1141 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 GRIK3Q13003 919 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 TAF11Q15544 211 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 ZC2HC1BQ5TFG8 222 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 ANKRD54Q6NXT1 300 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 MTSS1LQ765P7 747 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 NOTCH2NLQ7Z3S9 236 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 TADA2BQ86TJ2 420 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 TMTC1Q8IUR5 882 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 WDR63Q8IWG1 891 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 PLD5Q8N7P1 536 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 SCCPDHQ8NBX0 429 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 KCNH5Q8NCM2 988 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 TNIP2Q8NFZ5 429 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 BBS10Q8TAM1 723 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 ABTB1Q969K4 478 aaPredicted RBP3.47□□□□□ -1.85
SNX6-204ENST00000555541 FBXL8Q96CD0 374 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 SIN3AQ96ST3 1273 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 ISCA1Q9BUE6 129 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 KCNN2Q9H2S1 579 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 ESRP2Q9H6T0 727 aaKnown RBP3.47□□□□□ -1.85
SNX6-204ENST00000555541 CNGB3Q9NQW8 809 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 CTNNAL1Q9UBT7 734 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 COMMD10Q9Y6G5 202 aa3.47□□□□□ -1.85
SNX6-204ENST00000555541 TEX22C9J3V5 150 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 MMP2P08253 660 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 PATE4P0C8F1 98 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 PAX1P15863 534 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 SEC61BP60468 96 aaKnown RBP3.46□□□□□ -1.86
SNX6-204ENST00000555541 LPAL2Q16609 132 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 SGO1Q5FBB7 561 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 ATG16L1Q676U5 607 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 LCTLQ6UWM7 567 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 KRBA2Q6ZNG9 492 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.46□□□□□ -1.86
SNX6-204ENST00000555541 C1orf87Q8N0U7 546 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 BEST2Q8NFU1 509 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 PPM1EQ8WY54 764 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 ZNF570Q96NI8 536 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 RPS6KC1Q96S38 1066 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 EGFL8Q99944 293 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 ARPC5LQ9BPX5 153 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 KXD1Q9BQD3 176 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 MKKSQ9NPJ1 570 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms