RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 HOXD10P28358 340 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 ADSLP30566 484 aaPredicted RBP12.22□□□□□ -0.45
LRP1-207ENST00000554174 HERC3Q15034 1050 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 ZRSR2Q15696 482 aaKnown RBP12.22□□□□□ -0.45
LRP1-207ENST00000554174 UNC50Q53HI1 259 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 BNC2Q6ZN30 1099 aaPredicted RBP12.22□□□□□ -0.45
LRP1-207ENST00000554174 MDGA1Q8NFP4 955 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 GPR150Q8NGU9 434 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 OR4L1Q8NH43 312 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 PXYLP1Q8TE99 480 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 GDPD5Q8WTR4 605 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 GATA6Q92908 595 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 CDKN2AIPNLQ96HQ2 116 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 C3orf30Q96M34 536 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 CYP2S1Q96SQ9 504 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 NACA2Q9H009 215 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 MAGEH1Q9H213 219 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 EBF3Q9H4W6 596 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 HMX1Q9NP08 348 aaPredicted RBP12.22□□□□□ -0.45
LRP1-207ENST00000554174 CATSPERZQ9NTU4 200 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 DLGAP2Q9P1A6 1054 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 PRPF19Q9UMS4 504 aaKnown RBP12.22□□□□□ -0.45
LRP1-207ENST00000554174 MED16Q9Y2X0 877 aa12.22□□□□□ -0.45
LRP1-207ENST00000554174 H7C4K7 107 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 SCAMP3O14828 347 aaKnown RBP12.21□□□□□ -0.45
LRP1-207ENST00000554174 MAP3K13O43283 966 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 NDST3O95803 873 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 MTHFD2P13995 350 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 ZNF37AP17032 561 aaPredicted RBP12.21□□□□□ -0.45
LRP1-207ENST00000554174 CDKN1CP49918 316 aaPredicted RBP12.21□□□□□ -0.45
LRP1-207ENST00000554174 KPNA1P52294 538 aaPredicted RBP12.21□□□□□ -0.45
LRP1-207ENST00000554174 ZNF140P52738 457 aaPredicted RBP12.21□□□□□ -0.45
LRP1-207ENST00000554174 STC1P52823 247 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 SH3BP2P78314 561 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 ART3Q13508 389 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 SETMARQ53H47 684 aaPredicted RBP12.21□□□□□ -0.45
LRP1-207ENST00000554174 MRNIPQ6NTE8 343 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 SLC22A9Q8IVM8 553 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 PGAM4Q8N0Y7 254 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 FAM156AQ8NDB6 213 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 SEPT8Q92599 483 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 L3HYPDHQ96EM0 354 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 TMA16Q96EY4 203 aaKnown RBP12.21□□□□□ -0.45
LRP1-207ENST00000554174 ZNF599Q96NL3 588 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 PSKH2Q96QS6 385 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 RNF38Q9H0F5 515 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 EFCAB1Q9HAE3 211 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 EML4Q9HC35 981 aaKnown RBP12.21□□□□□ -0.45
LRP1-207ENST00000554174 FBRSL1Q9HCM7 1045 aaKnown RBP12.21□□□□□ -0.45
LRP1-207ENST00000554174 TRPC7Q9HCX4 862 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 COMMD8Q9NX08 183 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 IKZF3Q9UKT9 509 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 TRAF6Q9Y4K3 522 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 PTGDR2Q9Y5Y4 395 aa12.21□□□□□ -0.45
LRP1-207ENST00000554174 ANKRD36A6QL64 1941 aa12.21□□□□□ -0.46
LRP1-207ENST00000554174 UBXN8O00124 270 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 TSPAN3O60637 253 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 STC2O76061 302 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 MYCP01106 439 aaPredicted RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 UBTFL6P0CB48 400 aaPredicted RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 HSPA1AP0DMV8 641 aaKnown RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 HSPA1BP0DMV9 641 aaKnown RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 HMGA1P17096 107 aaKnown RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 CORO1AP31146 461 aaKnown RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 SLC26A3P40879 764 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 SLC11A2P49281 568 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 SUOXP51687 545 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 AQP4P55087 323 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 CDH4P55283 916 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 HERVK_113P63132 956 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 SATB1Q01826 763 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 SMARCB1Q12824 385 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 ELAVL2Q12926 359 aaKnown RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 BTG3Q14201 252 aaPredicted RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 UGT3A2Q3SY77 523 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 ACBD5Q5T8D3 534 aaPredicted RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 SLC8B1Q6J4K2 584 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 C16orf59Q7L2K0 433 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 SETD3Q86TU7 594 aaPredicted RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 PDSS2Q86YH6 399 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 PHC3Q8NDX5 983 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 OR4K2Q8NGD2 314 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 C2orf15Q8WU43 125 aaKnown RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 PEX13Q92968 403 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 NSUN5Q96P11 429 aaKnown RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 DDX50Q9BQ39 737 aaKnown RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 CINPQ9BW66 212 aaPredicted RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 ERVK-6Q9BXR3 956 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 GALPQ9UBC7 116 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 UBA2Q9UBT2 640 aaPredicted RBP12.2□□□□□ -0.46
LRP1-207ENST00000554174 SEPT3Q9UH03 358 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 VPS28Q9UK41 221 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 PCDHGC4Q9Y5F7 938 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 A0A1B0GTL3 188 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 C2orf78A6NCI8 922 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 CBX4O00257 560 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 FBP2O00757 339 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 KDELR3O43731 214 aa12.2□□□□□ -0.46
LRP1-207ENST00000554174 SNUPNO95149 360 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms