RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SHBQ15464 509 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 DCP2Q8IU60 420 aaKnown RBP22.83■■□□□ 1.25
TDP1-206ENST00000553569 PLA2G15Q8NCC3 412 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 DEFB124Q8NES8 71 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 DTD2Q96FN9 168 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 OR1A2Q9Y585 309 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 GOLGA6CA6NDK9 693 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 GOLGA6BA6NDN3 693 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 LIASO43766 372 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 SH3BP5O60239 455 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 CLDN7O95471 211 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 NDST3O95803 873 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 SLC4A1P02730 911 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 GOLGA6DP0CG33 693 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 ZNF30P17039 623 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 GDF10P55107 478 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 MPP3Q13368 585 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 MTM1Q13496 603 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 SNX1Q13596 522 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 FZD2Q14332 565 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 ZNF542PQ5EBM4 170 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 CCDC70Q6NSX1 233 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 RFLNAQ6ZTI6 216 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 Q6ZVL8 140 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 DGLUCYQ7Z3D6 616 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 GATAD2AQ86YP4 633 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 NAXDQ8IW45 347 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 SLC25A41Q8N5S1 370 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 SETD7Q8WTS6 366 aaKnown RBP22.82■■□□□ 1.24
TDP1-206ENST00000553569 MRGPRX2Q96LB1 330 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 CAMK1GQ96NX5 476 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 GORASP1Q9BQQ3 440 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 CAAP1Q9H8G2 361 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 DNAJC28Q9NX36 388 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 GOLGA6AQ9NYA3 693 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 CD84Q9UIB8 345 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 CABIN1Q9Y6J0 2220 aa22.82■■□□□ 1.24
TDP1-206ENST00000553569 TDRD6O60522 2096 aaKnown RBP22.81■■□□□ 1.24
TDP1-206ENST00000553569 SPTBN4Q9H254 2564 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 YKT6O15498 198 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 SDC3O75056 442 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 FGGP02679 453 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 EPHA8P29322 1005 aaPredicted RBP22.81■■□□□ 1.24
TDP1-206ENST00000553569 NOVA1P51513 510 aaKnown RBP22.81■■□□□ 1.24
TDP1-206ENST00000553569 STC1P52823 247 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 GEMP55040 296 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 YPEL5P62699 121 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 PTSQ03393 145 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 PRPSAP1Q14558 356 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 ARHGEF18Q6ZSZ5 1173 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 PARGQ86W56 976 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 PELI3Q8N2H9 469 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 LYSMD1Q96S90 227 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 FSD1LQ9BXM9 530 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 FRMD8P1Q9BZ68 369 aaPredicted RBP22.81■■□□□ 1.24
TDP1-206ENST00000553569 PCDHGB2Q9Y5G2 931 aa22.81■■□□□ 1.24
TDP1-206ENST00000553569 SPTY2D1-AS1A0A0U1RR47 76 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 C5orf60A6NFR6 353 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 ANXA9O76027 345 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 ATP1A1P05023 1023 aaKnown RBP22.8■■□□□ 1.24
TDP1-206ENST00000553569 ITGAVP06756 1048 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 MSNP26038 577 aaKnown RBP22.8■■□□□ 1.24
TDP1-206ENST00000553569 CHRNA4P43681 627 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 RXRGP48443 463 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 BNIP3Q12983 259 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 PTK2BQ14289 1009 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 SUZ12Q15022 739 aaKnown RBP22.8■■□□□ 1.24
TDP1-206ENST00000553569 SIX1Q15475 284 aaPredicted RBP22.8■■□□□ 1.24
TDP1-206ENST00000553569 LONRF2Q1L5Z9 754 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 PSAPL1Q6NUJ1 521 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 ESRP1Q6NXG1 681 aaKnown RBP22.8■■□□□ 1.24
TDP1-206ENST00000553569 LYSMD3Q7Z3D4 306 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 PIP4P1Q86T03 277 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 CBARPQ8N350 705 aaPredicted RBP22.8■■□□□ 1.24
TDP1-206ENST00000553569 APOOQ9BUR5 198 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 FICDQ9BVA6 458 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 SLC32A1Q9H598 525 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 SHOC2Q9UQ13 582 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 ZNF711Q9Y462 761 aa22.8■■□□□ 1.24
TDP1-206ENST00000553569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.8■■□□□ 1.24
TDP1-206ENST00000553569 K7ESM1 405 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 TOR1BO14657 336 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 FLRT2O43155 660 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 PCDHGA12O60330 932 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 ATXN1LP0C7T5 689 aaKnown RBP22.79■■□□□ 1.24
TDP1-206ENST00000553569 CSRP1P21291 193 aaKnown RBP22.79■■□□□ 1.24
TDP1-206ENST00000553569 OASLQ15646 514 aaKnown RBP22.79■■□□□ 1.24
TDP1-206ENST00000553569 PPM1JQ5JR12 505 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 SIRPB2Q5JXA9 342 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 RAET1GQ6H3X3 334 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 MACC1Q6ZN28 852 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 TECPR1Q7Z6L1 1165 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 CCHCR1Q8TD31 782 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 MAIP1Q8WWC4 291 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 KCTD5Q9NXV2 234 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 ZNF148Q9UQR1 794 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 BTBD3Q9Y2F9 522 aa22.79■■□□□ 1.24
TDP1-206ENST00000553569 LOC285095A0A1B0GVY8 99 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 GIPC1O14908 333 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 KCNK5O95279 499 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms