RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 EPHA8P29322 1005 aaPredicted RBP11.23□□□□□ -0.61
RAB5B-208ENST00000550283 CCDC15Q0P6D6 951 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 ELP6Q0PNE2 266 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 INPP5AQ14642 412 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 AGERQ15109 404 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 RALGPS1Q5JS13 557 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 LRRC66Q68CR7 880 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 ERAP2Q6P179 960 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 TECPR1Q7Z6L1 1165 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 IQCHQ86VS3 1027 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 NAXDQ8IW45 347 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 TAB3Q8N5C8 712 aaPredicted RBP11.23□□□□□ -0.61
RAB5B-208ENST00000550283 UBL4BQ8N7F7 174 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 GLIS1Q8NBF1 620 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 SLC35B2Q8TB61 432 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 BAHD1Q8TBE0 780 aaPredicted RBP11.23□□□□□ -0.61
RAB5B-208ENST00000550283 SAP25Q8TEE9 199 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 C1orf54Q8WWF1 131 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 SCAMP4Q969E2 229 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 MRGPRX2Q96LB1 330 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 GDF3Q9NR23 364 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 PCOLCE2Q9UKZ9 415 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 DNPEPQ9ULA0 475 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 PHTF1Q9UMS5 762 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 HS3ST3A1Q9Y663 406 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 CHD6Q8TD26 2715 aa11.23□□□□□ -0.61
RAB5B-208ENST00000550283 CNOT1A5YKK6 2376 aaKnown RBP11.23□□□□□ -0.61
RAB5B-208ENST00000550283 SPTY2D1-AS1A0A0U1RR47 76 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 TMEM202A6NGA9 273 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 CAPN8A6NHC0 703 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 TRIM38O00635 465 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 CASC3O15234 703 aaKnown RBP11.22□□□□□ -0.61
RAB5B-208ENST00000550283 KCNN4O15554 427 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-208ENST00000550283 NEBLO76041 1014 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 METTL18O95568 372 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 CER1O95813 267 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 PSMB4P28070 264 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 CA5AP35218 305 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 NUDT1P36639 197 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 NOVA1P51513 510 aaKnown RBP11.22□□□□□ -0.61
RAB5B-208ENST00000550283 SUOXP51687 545 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 STC1P52823 247 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 WNT3AP56704 352 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 XRCC4Q13426 336 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 PDE1CQ14123 709 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-208ENST00000550283 LRRC14Q15048 493 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 ACOX1Q15067 660 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 N4BP2L1Q5TBK1 243 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-208ENST00000550283 FAXCQ5TGI0 409 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 CCDC181Q5TID7 509 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 PID1Q7Z2X4 250 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 LYSMD3Q7Z3D4 306 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 SLC13A5Q86YT5 568 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-208ENST00000550283 SFTPA2Q8IWL1 248 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 C17orf53Q8N3J3 647 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-208ENST00000550283 PAF1Q8N7H5 531 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 FAM71DQ8N9W8 422 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 DENND6BQ8NEG7 585 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 DTD2Q96FN9 168 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 APOL2Q9BQE5 337 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 TMEM121Q9BTD3 319 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 ABCG8Q9H221 673 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 TOR4AQ9NXH8 423 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 KLHL8Q9P2G9 620 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-208ENST00000550283 PCYT1BQ9Y5K3 369 aaPredicted RBP11.22□□□□□ -0.61
RAB5B-208ENST00000550283 CABIN1Q9Y6J0 2220 aa11.22□□□□□ -0.61
RAB5B-208ENST00000550283 AKAP13Q12802 2813 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 HACD1B0YJ81 288 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 FPGTO14772 594 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 GCATO75600 419 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 TJP3O95049 919 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 AGTP01019 485 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 ATP1A1P05023 1023 aaKnown RBP11.21□□□□□ -0.61
RAB5B-208ENST00000550283 ZNF883P0CG24 379 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 ETS1P14921 441 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 DGKAP23743 735 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 RXRGP48443 463 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 CCT8P50990 548 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 CLDN6P56747 220 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 POLR2LP62875 67 aaKnown RBP11.21□□□□□ -0.61
RAB5B-208ENST00000550283 SNX1Q13596 522 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 SPARCL1Q14515 664 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 PTPRCAPQ14761 206 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 RPS6KA1Q15418 735 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 OASLQ15646 514 aaKnown RBP11.21□□□□□ -0.61
RAB5B-208ENST00000550283 ALG11Q2TAA5 492 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 SIRPB2Q5JXA9 342 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 ANKRD20A2Q5SQ80 823 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 ANKRD20A1Q5TYW2 823 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 ANKRD20A3Q5VUR7 823 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 DARS2Q6PI48 645 aaKnown RBP11.21□□□□□ -0.61
RAB5B-208ENST00000550283 IL27RAQ6UWB1 636 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 SLCO6A1Q86UG4 719 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 TRIM74Q86UV6 250 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 MARCH9Q86YJ5 346 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 SLC35F6Q8N357 371 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 SLC25A41Q8N5S1 370 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 PNPLA1Q8N8W4 532 aa11.21□□□□□ -0.61
RAB5B-208ENST00000550283 OR1E3Q8WZA6 343 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms