RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 MIER2Q8N344 545 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 RAB2BQ8WUD1 216 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 CELF6Q96J87 481 aaKnown RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 TNIP3Q96KP6 325 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 GLT1D1Q96MS3 346 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 OLFM1Q99784 485 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 DUSP16Q9BY84 665 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 SPON1Q9HCB6 807 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 WDR6Q9NNW5 1121 aaKnown RBP14.23□□□□□ -0.13
SRP54-202ENST00000546080 RNF19AQ9NV58 838 aa14.23□□□□□ -0.13
SRP54-202ENST00000546080 I6L893 689 aaPredicted RBP14.22□□□□□ -0.13
SRP54-202ENST00000546080 FXYD1O00168 92 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 CLDN5O00501 218 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 AURKAO14965 403 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 E2F6O75461 281 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 ALBP02768 609 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 JUNBP17275 347 aaPredicted RBP14.22□□□□□ -0.13
SRP54-202ENST00000546080 IMPDH1P20839 514 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 SLC6A2P23975 617 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 ADARB1P78563 741 aaKnown RBP14.22□□□□□ -0.13
SRP54-202ENST00000546080 ARL13BQ3SXY8 428 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 BROXQ5VW32 411 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 TMCO5AQ8N6Q1 288 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 LINC01465Q8N7H1 131 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 ZC3H15Q8WU90 426 aaKnown RBP14.22□□□□□ -0.13
SRP54-202ENST00000546080 LRRC58Q96CX6 371 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 CORO1BQ9BR76 489 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 BEGAINQ9BUH8 593 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 SPATC1LQ9H0A9 340 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 MUC13Q9H3R2 512 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 NANOGQ9H9S0 305 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 ATAD3AQ9NVI7 634 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 ANAPC2Q9UJX6 822 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 TMED5Q9Y3A6 229 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 C9JVG2 144 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 SEC14L2O76054 403 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 LDLRP01130 860 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 PGK2P07205 417 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 TXNP10599 105 aaKnown RBP14.22□□□□□ -0.13
SRP54-202ENST00000546080 NPR3P17342 541 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 ELK4P28324 431 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 RPS3AP61247 264 aaKnown RBP14.22□□□□□ -0.13
SRP54-202ENST00000546080 EN1Q05925 392 aaPredicted RBP14.22□□□□□ -0.13
SRP54-202ENST00000546080 BFSP2Q13515 415 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 ACAP2Q15057 778 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 ZBTB6Q15916 424 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 GEN1Q17RS7 908 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 IFNEQ86WN2 208 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 TBC1D21Q8IYX1 336 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 SFRP1Q8N474 314 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 B3GALNT2Q8NCR0 500 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 APPL2Q8NEU8 664 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 BPIFB6Q8NFQ5 453 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 PTCD2Q8WV60 388 aaKnown RBP14.22□□□□□ -0.13
SRP54-202ENST00000546080 SNX19Q92543 992 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 TAMM41Q96BW9 452 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 YIPF2Q9BWQ6 316 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 GPN2Q9H9Y4 310 aaPredicted RBP14.22□□□□□ -0.13
SRP54-202ENST00000546080 DAPK2Q9UIK4 370 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 FBXW11Q9UKB1 542 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 PSME2Q9UL46 239 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 FAM32AQ9Y421 112 aaKnown RBP14.22□□□□□ -0.13
SRP54-202ENST00000546080 SNX10Q9Y5X0 201 aa14.22□□□□□ -0.13
SRP54-202ENST00000546080 SHROOM3Q8TF72 1996 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 H0YAE9 185 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 CNOT3O75175 753 aaKnown RBP14.21□□□□□ -0.13
SRP54-202ENST00000546080 ANXA9O76027 345 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 BEST1O76090 585 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 CHRM3P20309 590 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 FOXM1Q08050 763 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 TUBA3CQ13748 450 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 SNX17Q15036 470 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 ZNF678Q5SXM1 525 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 KIAA0930Q6ICG6 404 aaPredicted RBP14.21□□□□□ -0.13
SRP54-202ENST00000546080 NEPROQ6NW34 567 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 KLHDC8BQ8IXV7 354 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 CLYBLQ8N0X4 340 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 OSCP1Q8WVF1 389 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 DCPSQ96C86 337 aaKnown RBP14.21□□□□□ -0.13
SRP54-202ENST00000546080 TSPAN17Q96FV3 270 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 TRIM8Q9BZR9 551 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 ING2Q9H160 280 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 RAD21L1Q9H4I0 556 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 DDIT4Q9NX09 232 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 GIN1Q9NXP7 522 aa14.21□□□□□ -0.13
SRP54-202ENST00000546080 TCRBV5S2A0A599 114 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 CACNG3O60359 315 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 KCNH1O95259 989 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 CLCN5P51795 746 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 RPS6KA2Q15349 733 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 SPATS1Q496A3 300 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 DENND5AQ6IQ26 1287 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 LEMD2Q8NC56 503 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 ZNF560Q96MR9 790 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 TSGA13Q96PP4 275 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 KCTD14Q9BQ13 255 aaPredicted RBP14.2□□□□□ -0.14
SRP54-202ENST00000546080 HEPHQ9BQS7 1158 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 LHPPQ9H008 270 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 ALG2Q9H553 416 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 ALG9Q9H6U8 611 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms