RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 FPGTO14772 594 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 AURKAO14965 403 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 ZNF185O15231 689 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 AGTP01019 485 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 CYP2A6P11509 494 aaPredicted RBP15.77■□□□□ 0.11
RPAIN-206ENST00000539417 BNIP3Q12983 259 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 LRRC14Q15048 493 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 AGERQ15109 404 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 TECPR1Q7Z6L1 1165 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 IQCHQ86VS3 1027 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 SLC25A41Q8N5S1 370 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 DENND6BQ8NEG7 585 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 IPMKQ8NFU5 416 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 CAMK1GQ96NX5 476 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 KLF15Q9UIH9 416 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 KIF5CO60282 957 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 OPHN1O60890 802 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 NDST3O95803 873 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 ZSCAN5DPP0CG00 497 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 KCNJ1P48048 391 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 STC1P52823 247 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 RPL26P61254 145 aaKnown RBP15.76■□□□□ 0.11
RPAIN-206ENST00000539417 FZD2Q14332 565 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 SPARCL1Q14515 664 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 INPP5AQ14642 412 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 SLC14A2Q15849 920 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 LONRF2Q1L5Z9 754 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 SIRPB2Q5JXA9 342 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 LYSMD3Q7Z3D4 306 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 ZSCAN30Q86W11 494 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 GATAD2AQ86YP4 633 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 RASGEF1CQ8N431 466 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 PRELID2Q8N945 189 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 IFT43Q96FT9 208 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 LYSMD1Q96S90 227 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 ELF4Q99607 663 aaPredicted RBP15.76■□□□□ 0.11
RPAIN-206ENST00000539417 APOL2Q9BQE5 337 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 GDF3Q9NR23 364 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 TM7SF3Q9NS93 570 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 RPL26L1Q9UNX3 145 aaKnown RBP15.76■□□□□ 0.11
RPAIN-206ENST00000539417 SHOC2Q9UQ13 582 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 BTBD3Q9Y2F9 522 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 OR1A2Q9Y585 309 aa15.76■□□□□ 0.11
RPAIN-206ENST00000539417 A0A1B0GTQ1 180 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 CER1O95813 267 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 CA4P22748 312 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 PDE1CQ14123 709 aaPredicted RBP15.75■□□□□ 0.11
RPAIN-206ENST00000539417 ARHGEF7Q14155 803 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 IL27RAQ6UWB1 636 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 SCAMP4Q969E2 229 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 RTP4Q96DX8 246 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 NUS1Q96E22 293 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 DTD2Q96FN9 168 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 OSBPL9Q96SU4 736 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 AGAP2Q99490 1192 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 FICDQ9BVA6 458 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 ADGRE3Q9BY15 652 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 ABCG8Q9H221 673 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 TCEAL2Q9H3H9 227 aaPredicted RBP15.75■□□□□ 0.11
RPAIN-206ENST00000539417 SNX12Q9UMY4 172 aa15.75■□□□□ 0.11
RPAIN-206ENST00000539417 C1orf232A0A0U1RR37 186 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 GIPC1O14908 333 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 SH3BP5O60239 455 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 SDC3O75056 442 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 USP12O75317 370 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 GCATO75600 419 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 SOD1P00441 154 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 SLC4A1P02730 911 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 ADRA1AP35348 466 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 RABIFP47224 123 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 GNG11P61952 73 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 OVGP1Q12889 678 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 EIF2B5Q13144 721 aaKnown RBP15.74■□□□□ 0.11
RPAIN-206ENST00000539417 CCNG2Q16589 344 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 TTC27Q6P3X3 843 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 KLHDC8BQ8IXV7 354 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 APOOQ9BUR5 198 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 LGR4Q9BXB1 951 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 AP1M1Q9BXS5 423 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 ZNF148Q9UQR1 794 aa15.74■□□□□ 0.11
RPAIN-206ENST00000539417 SPTY2D1-AS1A0A0U1RR47 76 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 PSMD11O00231 422 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 SCAMP1O15126 338 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 ID4P47928 161 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 GEMP55040 296 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 MPP3Q13368 585 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 SLC1A5Q15758 541 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 ITPRIPL1Q6GPH6 555 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 DENND5AQ6IQ26 1287 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 PNCKQ6P2M8 343 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 MICALCLQ6ZW33 695 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 KANSL1Q7Z3B3 1105 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 PIP4P1Q86T03 277 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 NDUFAF2Q8N183 169 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 DEFB124Q8NES8 71 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 SKA1Q96BD8 255 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 PBKQ96KB5 322 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 C1QTNF7Q9BXJ2 289 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 ERVMER34-1Q9H9K5 563 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 UCKL1Q9NWZ5 548 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms