RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ANKRD49Q8WVL7 239 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 OVCA2Q8WZ82 227 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 HLA-CQ95604 372 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 PABPC5Q96DU9 382 aaKnown RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 CDK5RAP1Q96SZ6 601 aaKnown RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 NDNQ99608 321 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 ZNF184Q99676 751 aaPredicted RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 MGME1Q9BQP7 344 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 NUF2Q9BZD4 464 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 POLR1EQ9GZS1 481 aaKnown RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 GSTO2Q9H4Y5 243 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 MEAF6Q9HAF1 191 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 ZBTB26Q9HCK0 441 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 MRGBPQ9NV56 204 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 MARCH4Q9P2E8 410 aaPredicted RBP9.27□□□□□ -0.93
DDB1-211ENST00000538280 STK39Q9UEW8 545 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 TTC3P53804 2025 aa9.27□□□□□ -0.93
DDB1-211ENST00000538280 COL4A6Q14031 1691 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 GOLGA8QA0A0J9YX86 632 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 LOC100653049A0A140TA62 436 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 GOLGA8OA6NCC3 632 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 GOLGA8NF8WBI6 632 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 H3BNX3 289 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 PITPNM1O00562 1244 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 ACSL4O60488 711 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 RPP40O75818 363 aaKnown RBP9.26□□□□□ -0.93
DDB1-211ENST00000538280 ZMPSTE24O75844 475 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 SOAT2O75908 522 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 KRT34O76011 436 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 PDE5AO76074 875 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 IPO13O94829 963 aaKnown RBP9.26□□□□□ -0.93
DDB1-211ENST00000538280 SORBS2O94875 1100 aaKnown RBP9.26□□□□□ -0.93
DDB1-211ENST00000538280 GALTP07902 379 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 CD1EP15812 388 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 ATF6P18850 670 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 CR2P20023 1033 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 KCNA5P22460 613 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 GATMP50440 423 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 ATP4BP51164 291 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 CDKN2DP55273 166 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 TIAL1Q01085 375 aaKnown RBP eCLIP9.26□□□□□ -0.93
DDB1-211ENST00000538280 KLC1Q07866 573 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 PEX6Q13608 980 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 PTK2BQ14289 1009 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 CSHL1Q14406 222 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 ZNF423Q2M1K9 1284 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 MGAT5BQ3V5L5 792 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 PIGGQ5H8A4 983 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 RTP2Q5QGT7 225 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 KLHDC10Q6PID8 442 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 TMEM207Q6UWW9 146 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 ANKS3Q6ZW76 656 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 KBTBD6Q86V97 674 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 CIR1Q86X95 450 aaPredicted RBP9.26□□□□□ -0.93
DDB1-211ENST00000538280 MIB1Q86YT6 1006 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 NPAS4Q8IUM7 802 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 KYQ8NBH2 561 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 PDZD8Q8NEN9 1154 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 DBF4BQ8NFT6 615 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 CEP70Q8NHQ1 597 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 HMGCLL1Q8TB92 370 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 GATA6Q92908 595 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 HDAC10Q969S8 669 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 RPRD1AQ96P16 312 aaPredicted RBP9.26□□□□□ -0.93
DDB1-211ENST00000538280 SEMA3CQ99985 751 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 ECSITQ9BQ95 431 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 TRMOQ9BU70 441 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 MRPL9Q9BYD2 267 aaKnown RBP9.26□□□□□ -0.93
DDB1-211ENST00000538280 SHCBP1LQ9BZQ2 653 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 MAGEH1Q9H213 219 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 CCSER2Q9H7U1 834 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 ACSS2Q9NR19 701 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 MTRRQ9UBK8 725 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 SARDHQ9UL12 918 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 VWA7Q9Y334 891 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 HCN4Q9Y3Q4 1203 aa9.26□□□□□ -0.93
DDB1-211ENST00000538280 COPG1Q9Y678 874 aaKnown RBP9.26□□□□□ -0.93
DDB1-211ENST00000538280 LINC01553A4QN01 128 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 TCAF2A6NFQ2 919 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 NEMP2A6NFY4 417 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 TMEM233B4DJY2 109 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 F5H5T6 163 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 NEMP1O14524 444 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 HOXA2O43364 376 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 PEX1O43933 1283 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 TLR5O60602 858 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 NDST3O95803 873 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 GOT2P00505 430 aaKnown RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 ALDH2P05091 517 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 CCDC166P0CW27 439 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 PIM1P11309 404 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 CD1DP15813 335 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 IMPDH1P20839 514 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 OR1E1P30953 314 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 SLC6A4P31645 630 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 RFC2P35250 354 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 PSMD8P48556 350 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 EPHB1P54762 984 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 CDH4P55283 916 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 ITKQ08881 620 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms