RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 KYNUQ16719 465 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 RFLNAQ6ZTI6 216 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 LYSMD3Q7Z3D4 306 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 GLT6D1Q7Z4J2 308 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 DSG4Q86SJ6 1040 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 EID2BQ96D98 161 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 MRRFQ96E11 262 aaKnown RBP12.4□□□□□ -0.42
PABPC1-219ENST00000522387 ZNF641Q96N77 438 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-219ENST00000522387 TUBGCP5Q96RT8 1024 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 NELL2Q99435 816 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 CASS4Q9NQ75 786 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 EIF2B3Q9NR50 452 aaKnown RBP12.4□□□□□ -0.42
PABPC1-219ENST00000522387 BFARQ9NZS9 450 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 B4GALT6Q9UBX8 382 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 A0A0J9YYE9 177 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 CXorf51AA0A1B0GTR3 108 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 NPC1O15118 1278 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 GPR39O43194 453 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 SOCS5O75159 536 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 TRBC1P01850 177 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 ADRB3P13945 408 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 SSTR1P30872 391 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 MAGEA6P43360 314 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 ZNF776Q68DI1 518 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-219ENST00000522387 CENPUQ71F23 418 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 SYT13Q7L8C5 426 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 PLPP6Q8IY26 295 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 TSTD1Q8NFU3 115 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 OR13C4Q8NGS5 318 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 OR14C36Q8NHC7 312 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 KCNV2Q8TDN2 545 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 KLK6Q92876 244 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 PBXIP1Q96AQ6 731 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 ECHDC3Q96DC8 303 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 SEC16BQ96JE7 1060 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 CDC42EP4Q9H3Q1 356 aaKnown RBP12.4□□□□□ -0.42
PABPC1-219ENST00000522387 EPHX3Q9H6B9 360 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 SUDS3Q9H7L9 328 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-219ENST00000522387 ACTR5Q9H9F9 607 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-219ENST00000522387 CD248Q9HCU0 757 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 TMEM221A6NGB7 291 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 M0R296 226 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 RIPK2O43353 540 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 PCDH8O95206 1070 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 HLA-DPA1P20036 260 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 LHCGRP22888 699 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 NMBRP28336 390 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 MAT2AP31153 395 aaKnown RBP12.39□□□□□ -0.43
PABPC1-219ENST00000522387 VASPP50552 380 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-219ENST00000522387 DGKEP52429 567 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 CDK16Q00536 496 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 LRRC66Q68CR7 880 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 ERN2Q76MJ5 926 aaKnown RBP12.39□□□□□ -0.43
PABPC1-219ENST00000522387 DEFB119Q8N690 84 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 TMIEQ8NEW7 156 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 PYROXD1Q8WU10 500 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 SIGLEC10Q96LC7 697 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 OSBPL1AQ9BXW6 950 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 GPR63Q9BZJ6 419 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 ABCG8Q9H221 673 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 SLC40A1Q9NP59 571 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 POLMQ9NP87 494 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-219ENST00000522387 KLC4Q9NSK0 619 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.39□□□□□ -0.432e-21■■■■■ 27.9
PABPC1-219ENST00000522387 SAMD15Q9P1V8 674 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 ARIH1Q9Y4X5 557 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-219ENST00000522387 SDR42E2A6NKP2 422 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 PSMD3O43242 534 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 RASSF9O75901 435 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 FGF1P05230 155 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 ACSL1P33121 698 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 MAGEA4P43358 317 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 EIF3BP55884 814 aaKnown RBP12.39□□□□□ -0.43
PABPC1-219ENST00000522387 GRM3Q14832 879 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 LONRF1Q17RB8 773 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 RALGPS1Q5JS13 557 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 ESRP1Q6NXG1 681 aaKnown RBP12.39□□□□□ -0.43
PABPC1-219ENST00000522387 BRAT1Q6PJG6 821 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 CACNA2D3Q8IZS8 1091 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 ABCA7Q8IZY2 2146 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 MCUQ8NE86 351 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 MDM1Q8TC05 714 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 NAT14Q8WUY8 206 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 PPP1R16AQ96I34 528 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 XAB2Q9HCS7 855 aaKnown RBP12.39□□□□□ -0.43
PABPC1-219ENST00000522387 SPATA6Q9NWH7 488 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-219ENST00000522387 EBF1Q9UH73 591 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 PHTF1Q9UMS5 762 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 CYP8B1Q9UNU6 501 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 RPS6KL1Q9Y6S9 549 aa12.39□□□□□ -0.43
PABPC1-219ENST00000522387 OR51F1A6NGY5 319 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 UPK3BL1B0FP48 263 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 UPK3BL2E5RIL1 263 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 EPOP01588 193 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 ITGB7P26010 798 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 GRIA4P48058 902 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 TPMTP51580 245 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 POLR2LP62875 67 aaKnown RBP12.38□□□□□ -0.43
PABPC1-219ENST00000522387 CAV1Q03135 178 aa12.38□□□□□ -0.43
PABPC1-219ENST00000522387 CNGA3Q16281 694 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms