RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 FOXP3Q9BZS1 431 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 TMEM168Q9H0V1 697 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 ISCUQ9H1K1 167 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 CARS2Q9HA77 564 aaKnown RBP10.89□□□□□ -0.67
PVT1-208ENST00000519481 MRPL40Q9NQ50 206 aaKnown RBP10.89□□□□□ -0.67
PVT1-208ENST00000519481 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.89□□□□□ -0.67
PVT1-208ENST00000519481 HAUS2Q9NVX0 235 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 GOLGA6AQ9NYA3 693 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 LRIT1Q9P2V4 623 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 RABGEF1Q9UJ41 708 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 PCDHGC4Q9Y5F7 938 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 PCDHGA7Q9Y5G6 932 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 BZW2Q9Y6E2 419 aaKnown RBP10.89□□□□□ -0.67
PVT1-208ENST00000519481 HELZ2Q9BYK8 2649 aaKnown RBP10.89□□□□□ -0.67
PVT1-208ENST00000519481 LRRK1Q38SD2 2015 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 KALRNO60229 2985 aa10.89□□□□□ -0.67
PVT1-208ENST00000519481 UNC13CQ8NB66 2214 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 A0A1B0GTH6 734 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 A0A1W2PQM1 296 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 RHPN2P1A8MT19 583 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 PSMD11O00231 422 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 HTRA2O43464 458 aaPredicted RBP10.88□□□□□ -0.67
PVT1-208ENST00000519481 NUDT21O43809 227 aaKnown RBP10.88□□□□□ -0.67
PVT1-208ENST00000519481 HEXIM1O94992 359 aaKnown RBP10.88□□□□□ -0.67
PVT1-208ENST00000519481 SKILP12757 684 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 SLC5A2P31639 672 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 SSR1P43307 286 aaKnown RBP10.88□□□□□ -0.67
PVT1-208ENST00000519481 MMP13P45452 471 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 CDH6P55285 790 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 CLN3Q13286 438 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 KRT81Q14533 505 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 CNGA3Q16281 694 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 MAP9Q49MG5 647 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 ARMC12Q5T9G4 340 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 CYP4V2Q6ZWL3 525 aaPredicted RBP10.88□□□□□ -0.67
PVT1-208ENST00000519481 USP45Q70EL2 814 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 POLNQ7Z5Q5 900 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 HEATR4Q86WZ0 1026 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 LRRC49Q8IUZ0 686 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 TEKT4Q8WW24 435 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 SPOCK2Q92563 424 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 COQ10AQ96MF6 247 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 CSPG4P5Q96PW8 444 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 SMG1Q96Q15 3661 aaKnown RBP10.88□□□□□ -0.67
PVT1-208ENST00000519481 CMKLR1Q99788 373 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 SUDS3Q9H7L9 328 aaPredicted RBP10.88□□□□□ -0.67
PVT1-208ENST00000519481 NOD2Q9HC29 1040 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 SEPT10Q9P0V9 454 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 PISDQ9UG56 409 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 IP6K2Q9UHH9 426 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 ATXN7L1Q9ULK2 861 aaPredicted RBP10.88□□□□□ -0.67
PVT1-208ENST00000519481 LOXL2Q9Y4K0 774 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 RNF215Q9Y6U7 377 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 MGAQ8IWI9 3026 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 KIF26BQ2KJY2 2108 aa10.88□□□□□ -0.67
PVT1-208ENST00000519481 AHCTF1Q8WYP5 2266 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 TTC24A2A3L6 582 aaPredicted RBP10.87□□□□□ -0.67
PVT1-208ENST00000519481 PMS2P1A4D2B8 440 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 CASC3O15234 703 aaKnown RBP10.87□□□□□ -0.67
PVT1-208ENST00000519481 NVLO15381 856 aaKnown RBP10.87□□□□□ -0.67
PVT1-208ENST00000519481 NOBOXO60393 691 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 MAFKO60675 156 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 RARAP10276 462 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 CCNB1P14635 433 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 IL1R2P27930 398 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 EPHB1P54762 984 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 ITKQ08881 620 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 HLTFQ14527 1009 aaKnown RBP eCLIP10.87□□□□□ -0.675e-7■■■□□ 16.8
PVT1-208ENST00000519481 HADHQ16836 314 aaKnown RBP10.87□□□□□ -0.67
PVT1-208ENST00000519481 FIGNQ5HY92 759 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 CCDC122Q5T0U0 273 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 PHF19Q5T6S3 580 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 TMEM164Q5U3C3 297 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 E4F1Q66K89 784 aaPredicted RBP10.87□□□□□ -0.67
PVT1-208ENST00000519481 RAET1GQ6H3X3 334 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 SPRED1Q7Z699 444 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 PIM3Q86V86 326 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 TP53INP2Q8IXH6 220 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 GPBAR1Q8TDU6 330 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 ZDHHC1Q8WTX9 485 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 DTD2Q96FN9 168 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 SCRN2Q96FV2 425 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 MGME1Q9BQP7 344 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 LGR4Q9BXB1 951 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 TRNAU1APQ9NX07 287 aaKnown RBP10.87□□□□□ -0.67
PVT1-208ENST00000519481 TMEM63CQ9P1W3 806 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 RCOR3Q9P2K3 495 aaPredicted RBP10.87□□□□□ -0.67
PVT1-208ENST00000519481 ANAPC7Q9UJX3 599 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 PCDHB11Q9Y5F2 797 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 ANKRD36A6QL64 1941 aa10.87□□□□□ -0.67
PVT1-208ENST00000519481 COL6A6A6NMZ7 2263 aa10.86□□□□□ -0.67
PVT1-208ENST00000519481 MYO1FO00160 1098 aa10.86□□□□□ -0.67
PVT1-208ENST00000519481 PGLSO95336 258 aa10.86□□□□□ -0.67
PVT1-208ENST00000519481 CPNE6O95741 557 aa10.86□□□□□ -0.67
PVT1-208ENST00000519481 SERPING1P05155 500 aa10.86□□□□□ -0.67
PVT1-208ENST00000519481 PYGLP06737 847 aa10.86□□□□□ -0.67
PVT1-208ENST00000519481 LIPCP11150 499 aa10.86□□□□□ -0.67
PVT1-208ENST00000519481 HGFP14210 728 aa10.86□□□□□ -0.67
PVT1-208ENST00000519481 PLA2G2AP14555 144 aa10.86□□□□□ -0.67
PVT1-208ENST00000519481 GM2AP17900 193 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms