RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 DFFAO00273 331 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 MTSS1O43312 755 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 NOL3O60936 208 aaKnown RBP12.39□□□□□ -0.43
PCM1-203ENST00000517545 PMPCBO75439 489 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 LRIG2O94898 1065 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 HOXA11P31270 313 aaPredicted RBP12.39□□□□□ -0.43
PCM1-203ENST00000517545 HOXD12P35452 270 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 HLCSP50747 726 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 FOXA1P55317 472 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 POU4F1Q01851 419 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 RGS21Q2M5E4 152 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 NIPAL1Q6NVV3 410 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 LINC00523Q86TU6 105 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 LDB1Q86U70 411 aaPredicted RBP12.39□□□□□ -0.43
PCM1-203ENST00000517545 IGFN1Q86VF2 1251 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 ANKRD13AQ8IZ07 590 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 SMG8Q8ND04 991 aaKnown RBP12.39□□□□□ -0.43
PCM1-203ENST00000517545 DNAJB14Q8TBM8 379 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 SNX19Q92543 992 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 TRIM15Q9C019 465 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 NANOGQ9H9S0 305 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 FBXW11Q9UKB1 542 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 ERGIC3Q9Y282 383 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 DNAJC15Q9Y5T4 150 aa12.39□□□□□ -0.43
PCM1-203ENST00000517545 TMEM247A6NEH6 219 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 LRRC14BA6NHZ5 514 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 ANGPT2O15123 496 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 CLASP2O75122 1294 aaKnown RBP12.38□□□□□ -0.43
PCM1-203ENST00000517545 BAIAP3O94812 1187 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 LTA4HP09960 611 aaKnown RBP12.38□□□□□ -0.43
PCM1-203ENST00000517545 HSD17B1P14061 328 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 NPR3P17342 541 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
PCM1-203ENST00000517545 AXLP30530 894 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 RFC2P35250 354 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 GMPSP49915 693 aaPredicted RBP12.38□□□□□ -0.43
PCM1-203ENST00000517545 RAB15P59190 212 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 SH3BP2P78314 561 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 KCNC4Q03721 635 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 OTUD3Q5T2D3 398 aaPredicted RBP12.38□□□□□ -0.43
PCM1-203ENST00000517545 AGAP9Q5VTM2 703 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 PPHLN1Q8NEY8 458 aaKnown RBP12.38□□□□□ -0.43
PCM1-203ENST00000517545 EDEM1Q92611 657 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 LRRC58Q96CX6 371 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 GLT1D1Q96MS3 346 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 MUS81Q96NY9 551 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 SEPHS2Q99611 448 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 MRGBPQ9NV56 204 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 PKD2L2Q9NZM6 624 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.38□□□□□ -0.43
PCM1-203ENST00000517545 OR12D3Q9UGF7 316 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 RAD54BQ9Y620 910 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 MCM3APO60318 1980 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 BCL10O95999 233 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 LGALS2P05162 132 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 KPNA2P52292 529 aaKnown RBP12.38□□□□□ -0.43
PCM1-203ENST00000517545 BFSP2Q13515 415 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 FUT11Q495W5 492 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 NEPROQ6NW34 567 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 TMEM207Q6UWW9 146 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 CLEC20AQ6ZU45 233 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 USP51Q70EK9 711 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 GPRIN1Q7Z2K8 1008 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 APPL2Q8NEU8 664 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 PPP1R13LQ8WUF5 828 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 TRUB1Q8WWH5 349 aaKnown RBP12.38□□□□□ -0.43
PCM1-203ENST00000517545 KCNA7Q96RP8 456 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 VAT1Q99536 393 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 HOPXQ9BPY8 73 aaPredicted RBP12.38□□□□□ -0.43
PCM1-203ENST00000517545 MAF1Q9H063 256 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 PIF1Q9H611 641 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 RIC8BQ9NVN3 520 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 LOC285556D6RIA3 1793 aa12.38□□□□□ -0.43
PCM1-203ENST00000517545 ZFC3H1O60293 1989 aaKnown RBP12.37□□□□□ -0.43
PCM1-203ENST00000517545 HTR3EA5X5Y0 456 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 H0Y858 1186 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 RECQL4O94761 1208 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 CPNE6O95741 557 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 SHMT2P34897 504 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 POLD2P49005 469 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 EIF2B2P49770 351 aaKnown RBP12.37□□□□□ -0.43
PCM1-203ENST00000517545 KPNA1P52294 538 aaPredicted RBP12.37□□□□□ -0.43
PCM1-203ENST00000517545 GRSF1Q12849 480 aaKnown RBP eCLIP12.37□□□□□ -0.43
PCM1-203ENST00000517545 ZNF484Q5JVG2 852 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 CCNYL2Q5T2Q4 361 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 PIM3Q86V86 326 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 TERB1Q8NA31 727 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 LHPPQ9H008 270 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 TLR9Q9NR96 1032 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 TREX1Q9NSU2 369 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 GID8Q9NWU2 228 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 DGKBQ9Y6T7 804 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 H3BMM5 538 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 CCL22O00626 93 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 PIP5K1BO14986 540 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 SYNCRIPO60506 623 aaKnown RBP12.37□□□□□ -0.43
PCM1-203ENST00000517545 KPNA6O60684 536 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 HUS1O60921 280 aa12.37□□□□□ -0.43
PCM1-203ENST00000517545 SIX3O95343 332 aaPredicted RBP12.37□□□□□ -0.43
PCM1-203ENST00000517545 IDUAP35475 653 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms