RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 QKIQ96PU8 341 aaKnown RBP eCLIP9.72□□□□□ -0.85
RNF4-221ENST00000513643 WDR24Q96S15 920 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 VAT1Q99536 393 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 TEX101Q9BY14 249 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 OSBPL8Q9BZF1 889 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 TCEAL2Q9H3H9 227 aaPredicted RBP9.72□□□□□ -0.85
RNF4-221ENST00000513643 GLOD4Q9HC38 313 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 PCDH9Q9HC56 1237 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 HAUS2Q9NVX0 235 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 NLGN3Q9NZ94 848 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 ANGPTL2Q9UKU9 493 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 CHKBQ9Y259 395 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 NEUROG3Q9Y4Z2 214 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 CAPN6Q9Y6Q1 641 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 ASXL3Q9C0F0 2248 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 KMT2BQ9UMN6 2715 aaPredicted RBP9.72□□□□□ -0.85
RNF4-221ENST00000513643 ANKRD36A6QL64 1941 aa9.72□□□□□ -0.85
RNF4-221ENST00000513643 ANKRD11Q6UB99 2663 aaPredicted RBP9.71□□□□□ -0.85
RNF4-221ENST00000513643 A0A0U1RQS6 177 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 TMEM202A6NGA9 273 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 A8MX80 341 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 MIF4GDA9UHW6 222 aaKnown RBP9.71□□□□□ -0.86
RNF4-221ENST00000513643 ENC1O14682 589 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 TNFRSF10CO14798 259 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 SIGLEC6O43699 453 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 SDC3O75056 442 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 LDOC1O95751 146 aaPredicted RBP9.71□□□□□ -0.86
RNF4-221ENST00000513643 FUCA1P04066 466 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 ALPIP09923 528 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 CYP2A6P11509 494 aaPredicted RBP9.71□□□□□ -0.86
RNF4-221ENST00000513643 CKMT2P17540 419 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 ACP1P24666 158 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 NFKBIAP25963 317 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 ETV3P41162 512 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 CD86P42081 329 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 ACADVLP49748 655 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 HK3P52790 923 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 CCZ1BP86790 482 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 CCZ1P86791 482 aaPredicted RBP9.71□□□□□ -0.86
RNF4-221ENST00000513643 ITKQ08881 620 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 ILKQ13418 452 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 LLGL1Q15334 1064 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 ALG11Q2TAA5 492 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 ZNF542PQ5EBM4 170 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 KAZNQ674X7 775 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 LRRC66Q68CR7 880 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 AADACL2Q6P093 401 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 KDELC1Q6UW63 502 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 RFLNAQ6ZTI6 216 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 USP45Q70EL2 814 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 TMPRSS7Q7RTY8 843 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 KIAA1328Q86T90 577 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 NRSN1Q8IZ57 195 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 SYCE1Q8N0S2 351 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 ZNF567Q8N184 647 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 CACTIN-AS1Q8N1I8 211 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 TXLNBQ8N3L3 684 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 SDR16C5Q8N3Y7 309 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 CHCHD4Q8N4Q1 142 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 PNPLA1Q8N8W4 532 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 CCDC112Q8NEF3 446 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 ZNF548Q8NEK5 533 aaPredicted RBP9.71□□□□□ -0.86
RNF4-221ENST00000513643 ACTL9Q8TC94 416 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 PDCD6IPQ8WUM4 868 aaKnown RBP9.71□□□□□ -0.86
RNF4-221ENST00000513643 BTN2A2Q8WVV5 523 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 GATA6Q92908 595 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 SCARF2Q96GP6 870 aaPredicted RBP9.71□□□□□ -0.86
RNF4-221ENST00000513643 CNDP2Q96KP4 475 aaKnown RBP9.71□□□□□ -0.86
RNF4-221ENST00000513643 AGAP3Q96P47 875 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 FCRL5Q96RD9 977 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 GORASP1Q9BQQ3 440 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 SCNM1Q9BWG6 230 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 LGR4Q9BXB1 951 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 HEMGNQ9BXL5 484 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 CEP41Q9BYV8 373 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 CLPBQ9H078 707 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 USP29Q9HBJ7 922 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 DNAJC28Q9NX36 388 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 AMFRQ9UKV5 643 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 DNPEPQ9ULA0 475 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 APOBEC2Q9Y235 224 aaKnown RBP9.71□□□□□ -0.86
RNF4-221ENST00000513643 MSRB2Q9Y3D2 182 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 OR1A2Q9Y585 309 aa9.71□□□□□ -0.86
RNF4-221ENST00000513643 TP53BP1Q12888 1972 aaPredicted RBP9.71□□□□□ -0.86
RNF4-221ENST00000513643 DSPP15924 2871 aaKnown RBP9.7□□□□□ -0.86
RNF4-221ENST00000513643 BPTFQ12830 3046 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 APC2O95996 2303 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 MACROD2A1Z1Q3 448 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 RGSL1A5PLK6 1076 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 NEMP2A6NFY4 417 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 LMO7DNF2Z398 122 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 AQP9O43315 295 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 HYAL3O43820 417 aaPredicted RBP9.7□□□□□ -0.86
RNF4-221ENST00000513643 MT-CYBP00156 380 aaPredicted RBP9.7□□□□□ -0.86
RNF4-221ENST00000513643 CEACAM5P06731 702 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 CDK4P11802 303 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 CKMT1AP12532 417 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 TSHRP16473 764 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 JUNDP17535 347 aa9.7□□□□□ -0.86
RNF4-221ENST00000513643 CTPS1P17812 591 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 228.1 ms