RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 CCR5P51681 352 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 PPP2CBP62714 309 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 RPS21P63220 83 aaKnown RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 PPP2CAP67775 309 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 FAM193AP78312 1265 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 SARNPP82979 210 aaKnown RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 CDH17Q12864 832 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 TCF15Q12870 199 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 OLIG2Q13516 323 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 SPARCL1Q14515 664 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 ELF2Q15723 593 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 CNGA3Q16281 694 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 SETMARQ53H47 684 aaPredicted RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 SIRPB2Q5JXA9 342 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 SYCP2LQ5T4T6 812 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 LRRC66Q68CR7 880 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 PMS2CLQ68D20 193 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 KIAA0895LQ68EN5 471 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 LIPIQ6XZB0 460 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 PPP1R21Q6ZMI0 780 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 CEP68Q76N32 757 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 LPCAT2Q7L5N7 544 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 GLT6D1Q7Z4J2 308 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 HOOK3Q86VS8 718 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 HORMAD1Q86X24 394 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 PPIL6Q8IXY8 311 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 RAVER1Q8IY67 606 aaKnown RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 SLC25A41Q8N5S1 370 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 BBOF1Q8ND07 529 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 PRSS33Q8NF86 280 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 CADM4Q8NFZ8 388 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 CXorf40AQ8TE69 158 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 CPT1BQ92523 772 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 SNF8Q96H20 258 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 ZC3H10Q96K80 434 aaKnown RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 APOL2Q9BQE5 337 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 DUSP15Q9H1R2 295 aaPredicted RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 TRABDQ9H4I3 376 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 MAGEE1Q9HCI5 957 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 CASS4Q9NQ75 786 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 KCTD5Q9NXV2 234 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 MBD1Q9UIS9 605 aaPredicted RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 GGT7Q9UJ14 662 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 SHOC2Q9UQ13 582 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 INVSQ9Y283 1065 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 ZNF711Q9Y462 761 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 VPS13AQ96RL7 3174 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 C1orf232A0A0U1RR37 186 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 A0A1W2PQU0 124 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 METTL12A8MUP2 240 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 RHOBTB1O94844 696 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 TMEM63AO94886 807 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 SEC31AO94979 1220 aaKnown RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 MLNP12872 115 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 C6P13671 934 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 ITIH2P19823 946 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 IVDP26440 423 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 HNF1BP35680 557 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 LIG3P49916 1009 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 PDE1BQ01064 536 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 CALCOCO2Q13137 446 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 SRSF5Q13243 272 aaKnown RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 SIM2Q14190 667 aaPredicted RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 MORF4L2Q15014 288 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 AGERQ15109 404 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 KCTD19Q17RG1 926 aaPredicted RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 PLK5Q496M5 336 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 GLE1Q53GS7 698 aaKnown RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 RNASEH2BQ5TBB1 312 aaKnown RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 IZUMO3Q5VZ72 239 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 DENND5AQ6IQ26 1287 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 LRRC8BQ6P9F7 803 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 ZNF534Q76KX8 674 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 LYSMD3Q7Z3D4 306 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 TSPAN33Q86UF1 283 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 NAT8LQ8N9F0 302 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 DNAAF3Q8N9W5 541 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 NOA1Q8NC60 698 aaKnown RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 MCUQ8NE86 351 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 DENND6BQ8NEG7 585 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 OR52K1Q8NGK4 314 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 BLOC1S5Q8TDH9 187 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 ASB12Q8WXK4 309 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 SNX19Q92543 992 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 BIRC7Q96CA5 298 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 HSPA12BQ96MM6 686 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 ERP44Q9BS26 406 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 LRRC1Q9BTT6 524 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 WRAP53Q9BUR4 548 aaKnown RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 C1QTNF7Q9BXJ2 289 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 SLC17A9Q9BYT1 436 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 FRMD8Q9BZ67 464 aaPredicted RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 GPR63Q9BZJ6 419 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 TRIM31Q9BZY9 425 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 EPC1Q9H2F5 836 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 C6orf106Q9H6K1 298 aaPredicted RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 ZFYVE1Q9HBF4 777 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 XAB2Q9HCS7 855 aaKnown RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 PKD2L2Q9NZM6 624 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms