RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ERMARDQ5T6L9 678 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 CCDC181Q5TID7 509 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 CAPRIN2Q6IMN6 1127 aaKnown RBP8.11□□□□□ -1.11
SCN1A-207ENST00000507401 LAYNQ6UX15 382 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 PRICKLE2Q7Z3G6 844 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 ZNF571Q7Z3V5 609 aaPredicted RBP8.11□□□□□ -1.11
SCN1A-207ENST00000507401 PYROXD2Q8N2H3 581 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 GALNT15Q8N3T1 639 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 TRIM11Q96F44 468 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 IFT43Q96FT9 208 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 LENG8Q96PV6 779 aaPredicted RBP8.11□□□□□ -1.11
SCN1A-207ENST00000507401 CPEB1Q9BZB8 566 aaKnown RBP8.11□□□□□ -1.11
SCN1A-207ENST00000507401 GRIP2Q9C0E4 1043 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 NSRP1Q9H0G5 558 aaKnown RBP8.11□□□□□ -1.11
SCN1A-207ENST00000507401 ISCUQ9H1K1 167 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 NOL6Q9H6R4 1146 aaKnown RBP8.11□□□□□ -1.11
SCN1A-207ENST00000507401 KLHL11Q9NVR0 708 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 TAS2R14Q9NYV8 317 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 RPL26L1Q9UNX3 145 aaKnown RBP8.11□□□□□ -1.11
SCN1A-207ENST00000507401 BTBD3Q9Y2F9 522 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 HRH3Q9Y5N1 445 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 FADS3Q9Y5Q0 445 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 SCINQ9Y6U3 715 aa8.11□□□□□ -1.11
SCN1A-207ENST00000507401 C16orf96A6NNT2 1141 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 RASA4BC9J798 803 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 MYO1FO00160 1098 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 RNF103O00237 685 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 MEN1O00255 615 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 DDX3XO00571 662 aaKnown RBP eCLIP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 SLC31A1O15431 190 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 RASA4O43374 803 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 BUB1O43683 1085 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 CREB3O43889 395 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 LDOC1O95751 146 aaPredicted RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 VIMP08670 466 aaKnown RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 THEGLP0DJG4 465 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 PSMA2P25787 234 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 EPHA8P29322 1005 aaPredicted RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 HNRNPH3P31942 346 aaKnown RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 ZBED6P86452 979 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 ROR2Q01974 943 aaKnown RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 OGDHQ02218 1023 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 KLHL30Q0D2K2 578 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 SGCGQ13326 291 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 ILKQ13418 452 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 SERINC3Q13530 473 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 GRM3Q14832 879 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 SMAD1Q15797 465 aaKnown RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 BOLA3Q53S33 107 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 C8orf74Q6P047 294 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 GDPD4Q6W3E5 623 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 KANSL1Q7Z3B3 1105 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 ABI3BPQ7Z7G0 1075 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 VWA5B2Q8N398 1253 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 RYBPQ8N488 228 aaPredicted RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 PNPLA1Q8N8W4 532 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 DRAXINQ8NBI3 349 aaPredicted RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 SPATA4Q8NEY3 305 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 GRIN3AQ8TCU5 1115 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 MIPOL1Q8TD10 442 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 LZICQ8WZA0 190 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 VOPP1Q96AW1 172 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 CCDC28BQ9BUN5 200 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 STMN4Q9H169 189 aaPredicted RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 LRRC19Q9H756 370 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 DKK3Q9UBP4 350 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 FTSJ1Q9UET6 329 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 CNOT8Q9UFF9 292 aaKnown RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 ZMIZ1Q9ULJ6 1067 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 ZFR2Q9UPR6 939 aaKnown RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 C15orf41Q9Y2V0 281 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 TRPM6Q9BX84 2022 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 PTPRBP23467 1997 aa8.1□□□□□ -1.11
SCN1A-207ENST00000507401 TP53BP1Q12888 1972 aaPredicted RBP8.1□□□□□ -1.11
SCN1A-207ENST00000507401 ASPMQ8IZT6 3477 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 ENO4A6NNW6 628 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 KRIT1O00522 736 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 TOR1BO14657 336 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 ENC1O14682 589 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 AREL1O15033 823 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 PRPSAP2O60256 369 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 IGSF6O95976 241 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 PAK4O96013 591 aaPredicted RBP8.09□□□□□ -1.11
SCN1A-207ENST00000507401 CKMT2P17540 419 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 PCK1P35558 622 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 HSPA9P38646 679 aaKnown RBP8.09□□□□□ -1.11
SCN1A-207ENST00000507401 SKIV2L2P42285 1042 aaKnown RBP8.09□□□□□ -1.11
SCN1A-207ENST00000507401 CSNK1DP48730 415 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 TPI1P60174 286 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 MRPS35P82673 323 aaKnown RBP8.09□□□□□ -1.11
SCN1A-207ENST00000507401 IL9RQ01113 521 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 NSUN2Q08J23 767 aaKnown RBP eCLIP8.09□□□□□ -1.11
SCN1A-207ENST00000507401 BNIP3Q12983 259 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 IFT88Q13099 833 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 ZNF211Q13398 564 aaPredicted RBP8.09□□□□□ -1.11
SCN1A-207ENST00000507401 CYTH1Q15438 398 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 HGSNATQ68CP4 663 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 SEL1L3Q68CR1 1132 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 SLC30A9Q6PML9 568 aa8.09□□□□□ -1.11
SCN1A-207ENST00000507401 PARS2Q7L3T8 475 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms