RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-208ENST00000490359 TARDBPQ13148 414 aaKnown RBP eCLIP16.8■□□□□ 0.28
LRCH4-208ENST00000490359 NFATC4Q14934 902 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 PTPRRQ15256 657 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 PPP2R5EQ16537 467 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 FAM182AQ5T1J6 154 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 TSPAN33Q86UF1 283 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 PLA2G15Q8NCC3 412 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 ZNF548Q8NEK5 533 aaPredicted RBP16.8■□□□□ 0.28
LRCH4-208ENST00000490359 LPCAT1Q8NF37 534 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 OR4C6Q8NH72 309 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 TFB1MQ8WVM0 346 aaKnown RBP16.8■□□□□ 0.28
LRCH4-208ENST00000490359 P3H4Q92791 437 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 HAUS1Q96CS2 278 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 NUS1Q96E22 293 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 COQ10AQ96MF6 247 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 AGAP3Q96P47 875 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 HEMGNQ9BXL5 484 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 TRIM10Q9UDY6 481 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 KLF15Q9UIH9 416 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 PPIL1Q9Y3C6 166 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 GPSM3Q9Y4H4 160 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 PCDHA3Q9Y5H8 950 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 LRRK1Q38SD2 2015 aa16.8■□□□□ 0.28
LRCH4-208ENST00000490359 TDRD6O60522 2096 aaKnown RBP16.79■□□□□ 0.28
LRCH4-208ENST00000490359 CCDC66A2RUB6 948 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 MMP2P08253 660 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 CTNNA2P26232 953 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 HTR1BP28222 390 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 ABCG1P45844 678 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 SKOR1P84550 965 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 PPARDQ03181 441 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 DNAJC3Q13217 504 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 PRKD1Q15139 912 aaPredicted RBP16.79■□□□□ 0.28
LRCH4-208ENST00000490359 COL28A1Q2UY09 1125 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 FAXCQ5TGI0 409 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 HES3Q5TGS1 186 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 CCDC181Q5TID7 509 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 BROXQ5VW32 411 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 HSD11B1LQ7Z5J1 315 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 PDZD3Q86UT5 571 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 PHACTR4Q8IZ21 702 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 RBFAQ8N0V3 343 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 CACTIN-AS1Q8N1I8 211 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 LRRC57Q8N9N7 239 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 LMX1AQ8TE12 382 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 SMIM14Q96QK8 99 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 SLC13A1Q9BZW2 595 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 PCDH9Q9HC56 1237 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 SPASTQ9UBP0 616 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 APOBEC3BQ9UH17 382 aaKnown RBP16.79■□□□□ 0.28
LRCH4-208ENST00000490359 DOLKQ9UPQ8 538 aa16.79■□□□□ 0.28
LRCH4-208ENST00000490359 ARID1BQ8NFD5 2236 aaPredicted RBP16.79■□□□□ 0.28
LRCH4-208ENST00000490359 FAM208BQ5VWN6 2430 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 COL5A1P20908 1838 aaPredicted RBP16.78■□□□□ 0.28
LRCH4-208ENST00000490359 A0A0J9YYE9 177 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 A0A0U1RQJ8 604 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 PSMD11O00231 422 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 CACNB4O00305 520 aaPredicted RBP16.78■□□□□ 0.28
LRCH4-208ENST00000490359 SCAMP1O15126 338 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 AQP9O43315 295 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 PRLP01236 227 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 TRBC1P01850 177 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 ACP1P24666 158 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 ETV3P41162 512 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 ACADVLP49748 655 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 COPS2P61201 443 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 RPL26P61254 145 aaKnown RBP16.78■□□□□ 0.28
LRCH4-208ENST00000490359 PROX2Q3B8N5 592 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 ENPP7Q6UWV6 458 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 BBS12Q6ZW61 710 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 NT5DC3Q86UY8 548 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 ZC3H18Q86VM9 953 aaKnown RBP16.78■□□□□ 0.28
LRCH4-208ENST00000490359 ATL2Q8NHH9 583 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 DTD2Q96FN9 168 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 DEPDC7Q96QD5 511 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 RBM15Q96T37 977 aaKnown RBP eCLIP16.78■□□□□ 0.28
LRCH4-208ENST00000490359 TCEAL2Q9H3H9 227 aaPredicted RBP16.78■□□□□ 0.28
LRCH4-208ENST00000490359 KCTD5Q9NXV2 234 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 NLGN3Q9NZ94 848 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 AMFRQ9UKV5 643 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 PNMA8BQ9ULN7 279 aaPredicted RBP16.78■□□□□ 0.28
LRCH4-208ENST00000490359 RPL26L1Q9UNX3 145 aaKnown RBP16.78■□□□□ 0.28
LRCH4-208ENST00000490359 CSNK1G3Q9Y6M4 447 aa16.78■□□□□ 0.28
LRCH4-208ENST00000490359 A0A0U1RQS6 177 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 GOLGA6CA6NDK9 693 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 GOLGA6BA6NDN3 693 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 CAPN8A6NHC0 703 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 K7ESM1 405 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 MTSS1O43312 755 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 GOLGA6DP0CG33 693 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 GIMD1P0DJR0 217 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 PTPN3P26045 913 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 CETN2P41208 172 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 BLKP51451 505 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 RWDD2BP57060 319 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 KIAA1024LP59773 190 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 C1orf61Q13536 156 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 ALG11Q2TAA5 492 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 TEX44Q53QW1 395 aa16.77■□□□□ 0.28
LRCH4-208ENST00000490359 PRRT3Q5FWE3 981 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms