RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 BCAT2O15382 392 aaPredicted RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 SLC22A3O75751 556 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 TFP02787 698 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 ATP1A1P05023 1023 aaKnown RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 GALTP07902 379 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 CYC1P08574 325 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 S1PR1P21453 382 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 SHMT1P34896 483 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 CDKN1AP38936 164 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 EIF2S3P41091 472 aaKnown RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 CLCNKAP51800 687 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 PITX1P78337 314 aaPredicted RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 PPFIA1Q13136 1202 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 HIST2H2ACQ16777 129 aaPredicted RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 GRAMD1BQ3KR37 738 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 CPLX2Q6PUV4 134 aaKnown RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 NFE4Q86UQ8 179 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 DHX40Q8IX18 779 aaKnown RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 ODF3L1Q8IXM7 274 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 KLHDC8BQ8IXV7 354 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 DSELQ8IZU8 1212 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 OR13A1Q8NGR1 328 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 NOC3LQ8WTT2 800 aaKnown RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 ABTB1Q969K4 478 aaPredicted RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 DUX3Q96PT4 197 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 BBS4Q96RK4 519 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 INTS2Q9H0H0 1204 aaKnown RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 CSTL1Q9H114 145 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 RIC8AQ9NPQ8 531 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 C20orf141Q9NUB4 165 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 ABCF3Q9NUQ8 709 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 TMEM160Q9NX00 188 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 SLC25A10Q9UBX3 287 aaPredicted RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 CNOT7Q9UIV1 285 aaKnown RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 POU2F3Q9UKI9 436 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 FAM96BQ9Y3D0 163 aa3.73□□□□□ -1.81
HMGN1-218ENST00000490032 LSM4Q9Y4Z0 139 aaKnown RBP3.73□□□□□ -1.81
HMGN1-218ENST00000490032 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 FAM72CH0Y354 149 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 TACC1O75410 805 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 G6PDP11413 515 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 RRM1P23921 792 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 PGM1P36871 562 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 USP8P40818 1118 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 IL15P40933 162 aaPredicted RBP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 TMPOP42166 694 aaKnown RBP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 METAP2P50579 478 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 CLCN3P51790 818 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 CDH15P55291 814 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 HNRNPH2P55795 449 aaKnown RBP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 RNPS1Q15287 305 aaKnown RBP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 C2orf68Q2NKX9 166 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 EIF2S3LQ2VIR3 472 aaKnown RBP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 FAM72AQ5TYM5 149 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 PLA2G4FQ68DD2 849 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 FAM72DQ6L9T8 149 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 TRNP1Q6NT89 227 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 SLC9B2Q86UD5 537 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 FAM72BQ86X60 149 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 C1orf87Q8N0U7 546 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 ZCCHC9Q8N567 271 aaKnown RBP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 SLC20A1Q8WUM9 679 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 CDCA5Q96FF9 252 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 ZSCAN31Q96LW9 406 aaPredicted RBP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 SH3GL2Q99962 352 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 LBHD1Q9BQE6 289 aaPredicted RBP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 HERPUD2Q9BSE4 406 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 HEMGNQ9BXL5 484 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 TTYH1Q9H313 450 aaPredicted RBP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 PLEKHA4Q9H4M7 779 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 BPIFA1Q9NP55 256 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 MMP25Q9NPA2 562 aa3.72□□□□□ -1.81
HMGN1-218ENST00000490032 FBXO9Q9UK97 447 aaPredicted RBP3.72□□□□□ -1.81
HMGN1-218ENST00000490032 LILRA5A6NI73 299 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 PIP5K1CO60331 668 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 GM2AP17900 193 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 HALP42357 657 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 NFIL3Q16649 462 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 NAA35Q5VZE5 725 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 RGMBQ6NW40 437 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 KCTD18Q6PI47 426 aaPredicted RBP3.71□□□□□ -1.82
HMGN1-218ENST00000490032 FBXO46Q6PJ61 603 aaPredicted RBP3.71□□□□□ -1.82
HMGN1-218ENST00000490032 SLC36A4Q6YBV0 504 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 KMT5CQ86Y97 462 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 ZBTB2Q8N680 514 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 METTL27Q8N6F8 245 aaPredicted RBP3.71□□□□□ -1.82
HMGN1-218ENST00000490032 BBS10Q8TAM1 723 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 FBXO17Q96EF6 278 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 RALYQ9UKM9 306 aaKnown RBP3.71□□□□□ -1.82
HMGN1-218ENST00000490032 AMDHD2Q9Y303 409 aa3.71□□□□□ -1.82
HMGN1-218ENST00000490032 AMBPP02760 352 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 IRF1P10914 325 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 ITGA2P17301 1181 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 DDIT3P35638 169 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 GABRB2P47870 512 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 FMO5P49326 533 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 RGS19P49795 217 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 TDGQ13569 410 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms